Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1323

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,561,417	+		Rru_A1322	0.44	+0.6
1,561,418	-		Rru_A1322	0.44	-0.1
1,561,426	+		Rru_A1322	0.44	-1.1
1,561,495	+		Rru_A1322	0.49	+1.5
1,561,496	-		Rru_A1322	0.49	+1.4
1,561,496	-		Rru_A1322	0.49	+1.1
1,561,536	+		Rru_A1322	0.51	-1.1
1,561,536	+		Rru_A1322	0.51	+0.6
1,561,536	+		Rru_A1322	0.51	+0.4
1,561,536	+		Rru_A1322	0.51	+0.9
1,561,537	-		Rru_A1322	0.51	-0.1
1,561,537	-		Rru_A1322	0.51	+0.1
1,561,633	+		Rru_A1322	0.57	+0.1
1,561,633	+		Rru_A1322	0.57	-0.1
1,561,634	-		Rru_A1322	0.57	-0.1
1,561,634	-		Rru_A1322	0.57	+0.9
1,561,720	+		Rru_A1322	0.62	-0.1
1,561,720	+		Rru_A1322	0.62	+0.8
1,561,720	+		Rru_A1322	0.62	-1.7
1,561,721	-		Rru_A1322	0.62	-0.1
1,562,054	-		Rru_A1322	0.82	-0.1
1,562,054	-		Rru_A1322	0.82	+1.3
1,562,098	+		Rru_A1322	0.85	-2.7
1,562,098	+		Rru_A1322	0.85	-0.1
1,562,098	+		Rru_A1322	0.85	-0.1
1,562,098	+		Rru_A1322	0.85	-0.1
1,562,099	-		Rru_A1322	0.85	+1.0
1,562,323	+				-0.1
1,562,323	+				-1.5
1,562,324	-				+0.9
1,562,324	-				+1.6
1,562,356	+				-0.8
1,562,356	+				-2.3
1,562,688	+				-1.2
1,562,688	+				-2.7
1,562,688	+				-0.1
1,562,704	-				-1.1
1,563,376	+		Rru_A1324	0.70	-1.7
1,563,376	+		Rru_A1324	0.70	-1.2
1,563,376	+		Rru_A1324	0.70	-0.1
1,563,376	+		Rru_A1324	0.70	-0.7
1,563,376	+		Rru_A1324	0.70	-0.5
1,563,377	-		Rru_A1324	0.70	-0.1
1,563,377	-		Rru_A1324	0.70	-0.1
1,563,377	-		Rru_A1324	0.70	+1.6
1,563,377	-		Rru_A1324	0.70	-1.1
1,563,377	-		Rru_A1324	0.70	+1.2
1,563,394	-		Rru_A1324	0.72	+1.1
1,563,394	-		Rru_A1324	0.72	+1.4
1,563,394	-		Rru_A1324	0.72	+0.8
1,563,397	+		Rru_A1324	0.72	-1.7
1,563,398	-		Rru_A1324	0.73	+0.7
1,563,398	-		Rru_A1324	0.73	-0.1
1,563,398	-		Rru_A1324	0.73	-0.1
1,563,677	+				-1.1
1,563,678	-				+0.6