Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1322

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,559,720	-				-1.4
1,559,720	-				+0.5
1,559,804	-				-0.1
1,560,195	+		Rru_A1321	0.45	-0.3
1,560,296	-		Rru_A1321	0.58	+1.2
1,560,696	+				+1.0
1,560,730	-				+1.3
1,560,894	+		Rru_A1322	0.13	+1.0
1,560,895	-		Rru_A1322	0.13	+0.7
1,561,081	+		Rru_A1322	0.24	+1.6
1,561,082	-		Rru_A1322	0.24	+0.5
1,561,082	-		Rru_A1322	0.24	-0.1
1,561,103	-		Rru_A1322	0.25	-0.1
1,561,144	+		Rru_A1322	0.28	-0.1
1,561,145	-		Rru_A1322	0.28	-0.1
1,561,146	+		Rru_A1322	0.28	-0.1
1,561,147	-		Rru_A1322	0.28	-0.1
1,561,147	-		Rru_A1322	0.28	-0.1
1,561,147	-		Rru_A1322	0.28	+1.5
1,561,147	-		Rru_A1322	0.28	+1.9
1,561,171	+		Rru_A1322	0.29	+0.7
1,561,171	+		Rru_A1322	0.29	+0.2
1,561,171	+		Rru_A1322	0.29	-0.9
1,561,171	+		Rru_A1322	0.29	+1.1
1,561,171	+		Rru_A1322	0.29	+0.9
1,561,172	-		Rru_A1322	0.29	+0.7
1,561,172	-		Rru_A1322	0.29	-0.4
1,561,417	+		Rru_A1322	0.44	+0.6
1,561,418	-		Rru_A1322	0.44	-0.1
1,561,426	+		Rru_A1322	0.44	-1.1
1,561,495	+		Rru_A1322	0.49	+1.5
1,561,496	-		Rru_A1322	0.49	+1.4
1,561,496	-		Rru_A1322	0.49	+1.1
1,561,536	+		Rru_A1322	0.51	-1.1
1,561,536	+		Rru_A1322	0.51	+0.6
1,561,536	+		Rru_A1322	0.51	+0.4
1,561,536	+		Rru_A1322	0.51	+0.9
1,561,537	-		Rru_A1322	0.51	-0.1
1,561,537	-		Rru_A1322	0.51	+0.1
1,561,633	+		Rru_A1322	0.57	+0.1
1,561,633	+		Rru_A1322	0.57	-0.1
1,561,634	-		Rru_A1322	0.57	-0.1
1,561,634	-		Rru_A1322	0.57	+0.9
1,561,720	+		Rru_A1322	0.62	-0.1
1,561,720	+		Rru_A1322	0.62	+0.8
1,561,720	+		Rru_A1322	0.62	-1.7
1,561,721	-		Rru_A1322	0.62	-0.1
1,562,054	-		Rru_A1322	0.82	-0.1
1,562,054	-		Rru_A1322	0.82	+1.3
1,562,098	+		Rru_A1322	0.85	-2.7
1,562,098	+		Rru_A1322	0.85	-0.1
1,562,098	+		Rru_A1322	0.85	-0.1
1,562,098	+		Rru_A1322	0.85	-0.1
1,562,099	-		Rru_A1322	0.85	+1.0
1,562,323	+				-0.1
1,562,323	+				-1.5
1,562,324	-				+0.9
1,562,324	-				+1.6
1,562,356	+				-0.8
1,562,356	+				-2.3
1,562,688	+				-1.2
1,562,688	+				-2.7
1,562,688	+				-0.1
1,562,704	-				-1.1