Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1256

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,476,736	+				-0.1
1,476,736	+				+0.6
1,476,737	-				+1.2
1,476,868	+		Rru_A1255	0.25	+1.0
1,476,868	+		Rru_A1255	0.25	-0.4
1,476,869	-		Rru_A1255	0.25	+1.1
1,476,869	-		Rru_A1255	0.25	-0.2
1,476,869	-		Rru_A1255	0.25	+0.7
1,476,869	-		Rru_A1255	0.25	+0.4
1,476,869	-		Rru_A1255	0.25	+0.7
1,476,869	-		Rru_A1255	0.25	-0.1
1,476,869	-		Rru_A1255	0.25	-0.2
1,476,869	-		Rru_A1255	0.25	+0.7
1,476,970	+		Rru_A1255	0.39	-0.1
1,477,072	-		Rru_A1255	0.52	+1.8
1,477,349	-				+0.3
1,477,480	+				+1.1
1,477,481	-				+1.5
1,477,481	-				-0.1
1,477,481	-				+0.9
1,477,481	-				+0.4
1,477,539	+				-0.1
1,477,681	+		Rru_A1256	0.18	-0.1
1,477,682	-		Rru_A1256	0.18	+0.7
1,477,834	+		Rru_A1256	0.47	-0.1
1,477,835	-		Rru_A1256	0.48	+0.5
1,478,137	+				-0.1
1,478,159	+				-0.1
1,478,315	+				-0.1
1,478,316	-				-0.1
1,478,383	-				-0.1
1,478,392	+				+1.9
1,478,392	+				-0.1
1,478,411	+				-0.5
1,478,437	+				-0.1
1,478,437	+				-0.1
1,478,438	-				+1.0
1,478,477	-				-1.1
1,478,533	-		Rru_A1257	0.11	-0.1
1,478,699	+		Rru_A1257	0.26	-0.1
1,478,709	-		Rru_A1257	0.27	+1.0
1,478,756	-		Rru_A1257	0.31	+1.2
1,478,756	-		Rru_A1257	0.31	+0.7
1,478,853	-		Rru_A1257	0.40	+1.0
1,478,853	-		Rru_A1257	0.40	-1.1
1,478,874	+		Rru_A1257	0.42	+1.2
1,478,874	+		Rru_A1257	0.42	-0.1
1,478,874	+		Rru_A1257	0.42	+1.4
1,478,874	+		Rru_A1257	0.42	-0.1
1,478,874	+		Rru_A1257	0.42	-0.1
1,478,874	+		Rru_A1257	0.42	+1.2
1,478,875	-		Rru_A1257	0.42	-0.1
1,478,961	+		Rru_A1257	0.50	+0.7
1,478,993	-		Rru_A1257	0.53	+0.6
1,479,084	+		Rru_A1257	0.61	+0.9
1,479,084	+		Rru_A1257	0.61	-0.1
1,479,084	+		Rru_A1257	0.61	+0.7
1,479,084	+		Rru_A1257	0.61	+0.9
1,479,085	-		Rru_A1257	0.61	-0.1