Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1177

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,392,068	-		Rru_A1176	0.32	-0.1
1,392,068	-		Rru_A1176	0.32	+0.7
1,392,070	-		Rru_A1176	0.33	-0.1
1,392,070	-		Rru_A1176	0.33	-0.8
1,392,070	-		Rru_A1176	0.33	+1.4
1,392,235	+		Rru_A1176	0.49	+1.4
1,392,236	-		Rru_A1176	0.49	+1.3
1,392,241	+		Rru_A1176	0.49	+0.5
1,392,241	+		Rru_A1176	0.49	+1.2
1,392,320	-		Rru_A1176	0.57	-0.1
1,392,352	+		Rru_A1176	0.60	+1.5
1,392,407	-		Rru_A1176	0.65	-0.1
1,392,412	+		Rru_A1176	0.66	+1.5
1,392,412	+		Rru_A1176	0.66	-0.1
1,392,413	-		Rru_A1176	0.66	-0.1
1,392,413	-		Rru_A1176	0.66	+0.9
1,392,413	-		Rru_A1176	0.66	+1.1
1,392,415	+		Rru_A1176	0.66	+0.4
1,392,416	-		Rru_A1176	0.66	+1.8
1,392,416	-		Rru_A1176	0.66	-0.1
1,392,416	-		Rru_A1176	0.66	+1.5
1,392,416	-		Rru_A1176	0.66	+2.1
1,392,701	-				+1.4
1,392,799	+				+1.6
1,392,800	-				+1.0
1,392,931	-				-0.1
1,393,319	+		Rru_A1177	0.23	+1.1
1,393,339	-		Rru_A1177	0.24	+1.1
1,393,339	-		Rru_A1177	0.24	+1.2
1,393,339	-		Rru_A1177	0.24	+0.8
1,393,530	+		Rru_A1177	0.38	+1.3
1,393,530	+		Rru_A1177	0.38	+1.7
1,393,531	-		Rru_A1177	0.38	-0.1
1,393,531	-		Rru_A1177	0.38	+0.7
1,393,531	-		Rru_A1177	0.38	-0.1
1,393,531	-		Rru_A1177	0.38	-0.1
1,394,426	+				+1.1
1,394,426	+				-0.1
1,394,427	-				+0.9
1,394,616	+				+0.9
1,394,617	-				+0.9
1,394,617	-				+1.1
1,394,620	+				+0.8
1,394,698	-				-0.1
1,394,854	-		Rru_A1178	0.11	+0.4
1,394,928	+		Rru_A1178	0.18	+0.9
1,395,107	+		Rru_A1178	0.33	-0.1
1,395,107	+		Rru_A1178	0.33	+0.8
1,395,108	-		Rru_A1178	0.33	+1.7
1,395,108	-		Rru_A1178	0.33	-0.1