Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1060

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,252,890	+		Rru_A1059	0.38	+1.5
1,252,891	-		Rru_A1059	0.38	-0.1
1,252,892	+		Rru_A1059	0.39	-0.1
1,252,892	+		Rru_A1059	0.39	+1.0
1,252,892	+		Rru_A1059	0.39	-0.1
1,252,893	-		Rru_A1059	0.39	-1.1
1,252,968	-		Rru_A1059	0.46	-0.1
1,252,968	-		Rru_A1059	0.46	+0.6
1,253,132	+		Rru_A1059	0.63	-0.1
1,253,132	+		Rru_A1059	0.63	+1.4
1,253,132	+		Rru_A1059	0.63	-0.1
1,253,132	+		Rru_A1059	0.63	+0.5
1,253,132	+		Rru_A1059	0.63	+1.5
1,253,132	+		Rru_A1059	0.63	+0.5
1,253,133	-		Rru_A1059	0.63	+2.8
1,253,133	-		Rru_A1059	0.63	+0.7
1,253,133	-		Rru_A1059	0.63	-0.1
1,253,133	-		Rru_A1059	0.63	+1.3
1,253,133	-		Rru_A1059	0.63	-0.1
1,253,133	-		Rru_A1059	0.63	-0.1
1,253,136	-		Rru_A1059	0.63	+0.3
1,253,136	-		Rru_A1059	0.63	-0.1
1,253,195	+		Rru_A1059	0.69	+0.6
1,253,195	+		Rru_A1059	0.69	-0.1
1,253,225	+		Rru_A1059	0.72	+0.7
1,253,225	+		Rru_A1059	0.72	+0.5
1,253,225	+		Rru_A1059	0.72	-0.1
1,253,226	-		Rru_A1059	0.72	+0.6
1,253,330	+		Rru_A1059	0.83	+1.2
1,253,330	+		Rru_A1059	0.83	+1.1
1,253,330	+		Rru_A1059	0.83	+0.5
1,253,330	+		Rru_A1059	0.83	-0.1
1,253,330	+		Rru_A1059	0.83	-0.1
1,253,330	+		Rru_A1059	0.83	+1.1
1,253,331	-		Rru_A1059	0.83	-0.1
1,253,331	-		Rru_A1059	0.83	+0.4
1,253,331	-		Rru_A1059	0.83	-0.1
1,253,331	-		Rru_A1059	0.83	+1.1
1,253,331	-		Rru_A1059	0.83	+0.7
1,253,334	+		Rru_A1059	0.83	-0.1
1,253,334	+		Rru_A1059	0.83	+1.1
1,253,334	+		Rru_A1059	0.83	+0.9
1,253,334	+		Rru_A1059	0.83	+1.2
1,253,334	+		Rru_A1059	0.83	-0.1
1,253,334	+		Rru_A1059	0.83	-0.1
1,253,335	-		Rru_A1059	0.84	+0.4
1,253,335	-		Rru_A1059	0.84	-0.1
1,253,335	-		Rru_A1059	0.84	+2.1
1,253,335	-		Rru_A1059	0.84	+0.8
1,253,335	-		Rru_A1059	0.84	-0.1
1,253,417	+				-1.1
1,253,417	+				+0.6
1,253,417	+				+1.2
1,253,417	+				-1.1
1,253,418	-				-0.1
1,253,418	-				+0.8
1,253,418	-				+0.4
1,253,501	+				+0.4
1,253,502	-				+0.9
1,253,502	-				-0.1
1,253,502	-				+1.6
1,253,502	-				+0.9
1,253,502	-				-0.1
1,253,502	-				+1.9
1,253,502	-				+0.8
1,253,502	-				-1.1
1,253,538	-				-0.1
1,253,538	-				-0.1
1,253,549	+				-0.1
1,253,601	+				-0.1
1,254,063	+		Rru_A1060	0.49	-0.1
1,254,063	+		Rru_A1060	0.49	-0.1
1,254,279	+		Rru_A1060	0.72	-1.1
1,254,279	+		Rru_A1060	0.72	-1.1
1,254,280	-		Rru_A1060	0.72	-0.1
1,254,477	-				+0.3
1,254,535	+				+1.7
1,254,602	+				-0.1
1,254,608	+				-0.1
1,254,740	+		Rru_A1061	0.50	-0.4
1,254,740	+		Rru_A1061	0.50	-0.1
1,254,741	-		Rru_A1061	0.50	-0.1
1,254,745	-		Rru_A1061	0.52	+0.5
1,254,818	+		Rru_A1061	0.86	-0.1
1,254,846	-				-0.1
1,254,867	+				-0.1
1,254,867	+				+0.8
1,254,868	-				+1.1
1,254,868	-				+1.4
1,254,990	-		Rru_A1062	0.41	-0.1
1,255,086	+		Rru_A1062	0.67	+1.0
1,255,086	+		Rru_A1062	0.67	+1.8
1,255,087	-		Rru_A1062	0.67	-0.1
1,255,087	-		Rru_A1062	0.67	-0.1
1,255,195	+				+0.8
1,255,195	+				-0.1
1,255,196	-				+1.2
1,255,205	-				-0.1
1,255,348	+		Rru_A1063	0.30	+1.0