Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1055

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,247,992	+		Rru_A1054	0.33	+0.9
1,247,993	-		Rru_A1054	0.33	+1.1
1,248,060	+		Rru_A1054	0.38	+0.7
1,248,060	+		Rru_A1054	0.38	+0.5
1,248,060	+		Rru_A1054	0.38	+1.2
1,248,061	-		Rru_A1054	0.38	-0.1
1,248,061	-		Rru_A1054	0.38	+1.0
1,248,061	-		Rru_A1054	0.38	+1.5
1,248,061	-		Rru_A1054	0.38	+0.8
1,248,562	+		Rru_A1054	0.76	+0.1
1,248,562	+		Rru_A1054	0.76	+0.8
1,248,562	+		Rru_A1054	0.76	-0.1
1,248,562	+		Rru_A1054	0.76	-0.1
1,248,563	-		Rru_A1054	0.76	-0.1
1,248,563	-		Rru_A1054	0.76	+1.3
1,248,883	+				+0.6
1,248,883	+				+1.3
1,248,884	-				-0.1
1,249,009	+				-0.1
1,249,010	-				-0.1
1,249,010	-				-1.1
1,249,010	-				-0.1
1,249,041	-		Rru_A1055	0.11	-0.2
1,249,042	+		Rru_A1055	0.11	+1.0
1,249,042	+		Rru_A1055	0.11	+0.5
1,249,313	-		Rru_A1055	0.55	-0.1
1,249,784	-				-0.1
1,249,784	-				-0.1
1,249,784	-				-0.1
1,249,784	-				-0.2
1,249,784	-				+1.4
1,250,148	+		Rru_A1056	0.32	+0.7
1,250,149	-		Rru_A1056	0.32	-0.1
1,250,151	-		Rru_A1056	0.32	+0.9
1,250,151	-		Rru_A1056	0.32	+0.9
1,250,222	+		Rru_A1056	0.39	-0.1
1,250,223	-		Rru_A1056	0.39	+0.7
1,250,237	+		Rru_A1056	0.40	-0.1
1,250,238	-		Rru_A1056	0.40	-0.1
1,250,306	+		Rru_A1056	0.47	+1.3
1,250,306	+		Rru_A1056	0.47	+1.0
1,250,307	-		Rru_A1056	0.47	+0.8
1,250,307	-		Rru_A1056	0.47	-0.1
1,250,307	-		Rru_A1056	0.47	+0.4
1,250,307	-		Rru_A1056	0.47	+1.2
1,250,433	+		Rru_A1056	0.60	+0.7
1,250,433	+		Rru_A1056	0.60	-0.1
1,250,519	+		Rru_A1056	0.68	-0.1
1,250,520	-		Rru_A1056	0.69	-0.1
1,250,520	-		Rru_A1056	0.69	-0.1