Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rru_A0701 and Rru_A0702 are separated by 156 nucleotides Rru_A0702 and Rru_A0703 are separated by 3 nucleotides Rru_A0703 and Rru_A0704 are separated by 72 nucleotides
Rru_A0701: Rru_A0701 - Ribosomal protein S4 (NCBI), at 830,110 to 830,724
_A0701
Rru_A0702: Rru_A0702 - Molybdate ABC transporter, ATP-binding protein (NCBI), at 830,881 to 831,993
_A0702
Rru_A0703: Rru_A0703 - Molybdate ABC transporter, permease protein (NCBI), at 831,997 to 832,689
_A0703
Rru_A0704: Rru_A0704 - Molybdenum ABC transporter, periplasmic binding protein (NCBI), at 832,762 to 833,538
_A0704
Position (kb) 830
831
832 Strain fitness (log2 ratio) -1
0
1 at 829.908 kb on + strand at 829.993 kb on + strand at 830.874 kb on + strand at 830.882 kb on + strand at 830.883 kb on - strand at 831.147 kb on + strand, within Rru_A0702 at 831.148 kb on - strand, within Rru_A0702 at 831.434 kb on + strand, within Rru_A0702 at 831.435 kb on - strand, within Rru_A0702 at 831.435 kb on - strand, within Rru_A0702 at 831.435 kb on - strand, within Rru_A0702 at 831.668 kb on + strand, within Rru_A0702 at 831.723 kb on + strand, within Rru_A0702 at 831.723 kb on + strand, within Rru_A0702 at 831.724 kb on - strand, within Rru_A0702 at 831.984 kb on + strand at 831.984 kb on + strand at 831.985 kb on - strand at 831.998 kb on + strand at 832.128 kb on + strand, within Rru_A0703 at 832.129 kb on - strand, within Rru_A0703 at 832.131 kb on - strand, within Rru_A0703 at 832.167 kb on + strand, within Rru_A0703 at 832.445 kb on + strand, within Rru_A0703 at 832.446 kb on - strand, within Rru_A0703 at 832.529 kb on - strand, within Rru_A0703 at 832.754 kb on + strand at 832.784 kb on + strand at 832.880 kb on + strand, within Rru_A0704 at 832.881 kb on - strand, within Rru_A0704 at 832.881 kb on - strand, within Rru_A0704 at 832.881 kb on - strand, within Rru_A0704 at 832.958 kb on + strand, within Rru_A0704 at 832.959 kb on - strand, within Rru_A0704
Per-strain Table
Position Strand Gene LocusTag Fraction Succinic Acid; Light intensity 9 uM remove 829,908 + +0.9 829,993 + +0.4 830,874 + +0.7 830,882 + -0.0 830,883 - -0.0 831,147 + Rru_A0702 0.24 +1.0 831,148 - Rru_A0702 0.24 +0.5 831,434 + Rru_A0702 0.50 -0.0 831,435 - Rru_A0702 0.50 +1.0 831,435 - Rru_A0702 0.50 +1.3 831,435 - Rru_A0702 0.50 -0.3 831,668 + Rru_A0702 0.71 +1.0 831,723 + Rru_A0702 0.76 -0.0 831,723 + Rru_A0702 0.76 -0.0 831,724 - Rru_A0702 0.76 +1.2 831,984 + -0.0 831,984 + +0.7 831,985 - +1.2 831,998 + -0.0 832,128 + Rru_A0703 0.19 -0.0 832,129 - Rru_A0703 0.19 -0.0 832,131 - Rru_A0703 0.19 -1.6 832,167 + Rru_A0703 0.25 -0.0 832,445 + Rru_A0703 0.65 +1.2 832,446 - Rru_A0703 0.65 +0.8 832,529 - Rru_A0703 0.77 -0.0 832,754 + +1.3 832,784 + -0.2 832,880 + Rru_A0704 0.15 -0.0 832,881 - Rru_A0704 0.15 -0.0 832,881 - Rru_A0704 0.15 -0.0 832,881 - Rru_A0704 0.15 +1.5 832,958 + Rru_A0704 0.25 -1.0 832,959 - Rru_A0704 0.25 -1.0
Or see this region's nucleotide sequence