Experiment: D-Glucose (C); no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4012 and Ga0059261_4013 are separated by 102 nucleotides Ga0059261_4013 and Ga0059261_4014 are separated by 105 nucleotides Ga0059261_4014 and Ga0059261_4015 are separated by 108 nucleotides Ga0059261_4015 and Ga0059261_4016 overlap by 4 nucleotides
Ga0059261_4012: Ga0059261_4012 - AMP nucleosidase, at 4,127,325 to 4,128,776
_4012
Ga0059261_4013: Ga0059261_4013 - hypothetical protein, at 4,128,879 to 4,129,118
_4013
Ga0059261_4014: Ga0059261_4014 - Peroxiredoxin, at 4,129,224 to 4,129,703
_4014
Ga0059261_4015: Ga0059261_4015 - Putative transcriptional regulator, at 4,129,812 to 4,130,372
_4015
Ga0059261_4016: Ga0059261_4016 - Predicted transcriptional regulator, at 4,130,369 to 4,131,334
_4016
Position (kb) 4129
4130 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4128.421 kb on + strand, within Ga0059261_4012 at 4128.421 kb on + strand, within Ga0059261_4012 at 4128.422 kb on - strand at 4128.472 kb on + strand, within Ga0059261_4012 at 4128.473 kb on - strand, within Ga0059261_4012 at 4128.473 kb on - strand, within Ga0059261_4012 at 4128.509 kb on - strand, within Ga0059261_4012 at 4128.698 kb on + strand at 4128.698 kb on + strand at 4128.698 kb on + strand at 4128.733 kb on + strand at 4128.788 kb on - strand at 4128.870 kb on + strand at 4128.870 kb on + strand at 4128.880 kb on + strand at 4128.880 kb on + strand at 4128.881 kb on - strand at 4128.919 kb on + strand, within Ga0059261_4013 at 4128.920 kb on - strand, within Ga0059261_4013 at 4128.920 kb on - strand, within Ga0059261_4013 at 4129.243 kb on + strand at 4129.244 kb on - strand at 4129.664 kb on - strand at 4129.798 kb on + strand at 4129.799 kb on - strand at 4129.799 kb on - strand at 4129.812 kb on - strand at 4129.812 kb on - strand at 4129.827 kb on + strand at 4129.827 kb on + strand at 4129.827 kb on + strand at 4129.828 kb on - strand at 4129.828 kb on - strand at 4129.828 kb on - strand at 4130.196 kb on + strand, within Ga0059261_4015 at 4130.196 kb on + strand, within Ga0059261_4015 at 4130.196 kb on + strand, within Ga0059261_4015 at 4130.196 kb on + strand, within Ga0059261_4015 at 4130.196 kb on + strand, within Ga0059261_4015 at 4130.197 kb on - strand, within Ga0059261_4015 at 4130.197 kb on - strand, within Ga0059261_4015 at 4130.197 kb on - strand, within Ga0059261_4015 at 4130.197 kb on - strand, within Ga0059261_4015 at 4130.280 kb on + strand, within Ga0059261_4015 at 4130.280 kb on + strand, within Ga0059261_4015 at 4130.280 kb on + strand, within Ga0059261_4015 at 4130.280 kb on + strand, within Ga0059261_4015 at 4130.281 kb on - strand, within Ga0059261_4015 at 4130.281 kb on - strand, within Ga0059261_4015 at 4130.296 kb on - strand, within Ga0059261_4015 at 4130.370 kb on + strand at 4130.370 kb on + strand at 4130.370 kb on + strand at 4130.370 kb on + strand at 4130.370 kb on + strand at 4130.371 kb on - strand at 4130.371 kb on - strand at 4130.637 kb on + strand, within Ga0059261_4016 at 4130.637 kb on + strand, within Ga0059261_4016 at 4130.637 kb on + strand, within Ga0059261_4016 at 4130.637 kb on + strand, within Ga0059261_4016 at 4130.638 kb on - strand, within Ga0059261_4016 at 4130.638 kb on - strand, within Ga0059261_4016
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); no added vitamins remove 4,128,421 + Ga0059261_4012 0.75 +0.1 4,128,421 + Ga0059261_4012 0.75 +3.5 4,128,422 - +1.0 4,128,472 + Ga0059261_4012 0.79 +0.9 4,128,473 - Ga0059261_4012 0.79 +2.8 4,128,473 - Ga0059261_4012 0.79 +0.8 4,128,509 - Ga0059261_4012 0.82 -1.3 4,128,698 + +2.0 4,128,698 + -0.9 4,128,698 + +1.3 4,128,733 + +2.1 4,128,788 - +0.1 4,128,870 + -2.0 4,128,870 + -1.0 4,128,880 + +0.6 4,128,880 + +0.8 4,128,881 - -1.0 4,128,919 + Ga0059261_4013 0.17 +0.4 4,128,920 - Ga0059261_4013 0.17 -0.7 4,128,920 - Ga0059261_4013 0.17 -1.4 4,129,243 + -0.8 4,129,244 - +0.1 4,129,664 - -0.2 4,129,798 + -1.4 4,129,799 - +0.9 4,129,799 - +0.8 4,129,812 - -0.2 4,129,812 - -0.6 4,129,827 + +0.1 4,129,827 + +1.1 4,129,827 + +1.8 4,129,828 - -1.7 4,129,828 - +0.1 4,129,828 - -0.4 4,130,196 + Ga0059261_4015 0.68 +0.1 4,130,196 + Ga0059261_4015 0.68 +0.7 4,130,196 + Ga0059261_4015 0.68 +0.5 4,130,196 + Ga0059261_4015 0.68 +0.4 4,130,196 + Ga0059261_4015 0.68 +1.1 4,130,197 - Ga0059261_4015 0.69 +1.3 4,130,197 - Ga0059261_4015 0.69 +0.0 4,130,197 - Ga0059261_4015 0.69 +1.6 4,130,197 - Ga0059261_4015 0.69 +0.8 4,130,280 + Ga0059261_4015 0.83 +0.2 4,130,280 + Ga0059261_4015 0.83 +0.9 4,130,280 + Ga0059261_4015 0.83 +1.7 4,130,280 + Ga0059261_4015 0.83 +1.3 4,130,281 - Ga0059261_4015 0.84 +1.1 4,130,281 - Ga0059261_4015 0.84 +1.0 4,130,296 - Ga0059261_4015 0.86 +0.4 4,130,370 + +0.6 4,130,370 + +0.0 4,130,370 + +0.8 4,130,370 + +0.2 4,130,370 + +0.5 4,130,371 - -0.3 4,130,371 - -0.5 4,130,637 + Ga0059261_4016 0.28 -0.4 4,130,637 + Ga0059261_4016 0.28 +1.3 4,130,637 + Ga0059261_4016 0.28 -0.1 4,130,637 + Ga0059261_4016 0.28 +2.6 4,130,638 - Ga0059261_4016 0.28 +1.0 4,130,638 - Ga0059261_4016 0.28 +0.1
Or see this region's nucleotide sequence