Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3607

Experiment: D-Glucose (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); no added vitamins
3,724,517	+				-0.6
3,724,517	+				+0.1
3,724,517	+				-0.9
3,724,518	-				-0.0
3,724,551	+				-1.2
3,724,551	+				+1.1
3,724,575	-		Ga0059261_3605	0.10	-4.1
3,724,588	-		Ga0059261_3605	0.27	-0.2
3,724,588	-				-1.6
3,724,604	-		Ga0059261_3605	0.48	-0.3
3,724,769	+				-0.4
3,724,769	+				+1.2
3,724,857	+				-2.0
3,724,857	+				-3.4
3,724,857	+				+0.3
3,724,858	-				-0.6
3,724,858	-				-2.6
3,724,858	-				+2.1
3,724,858	-				-0.4
3,724,858	-				+0.3
3,724,858	-				-2.0
3,724,876	-				-3.3
3,724,920	+				-3.7
3,724,920	+				-1.9
3,724,921	-		Ga0059261_3606	0.10	-0.2
3,724,921	-		Ga0059261_3606	0.10	-0.3
3,724,921	-		Ga0059261_3606	0.10	-0.4
3,724,921	-		Ga0059261_3606	0.10	-3.6
3,725,084	-		Ga0059261_3606	0.50	+0.5
3,725,145	+		Ga0059261_3606	0.64	-0.1
3,725,285	+				-0.2
3,725,285	+				-2.7
3,725,285	+				-1.5
3,725,285	+				-0.8
3,725,285	+				-2.1
3,725,285	+				-0.2
3,725,370	+				+0.6
3,725,370	+				+0.3
3,725,371	-				-1.1
3,725,371	-				+0.7
3,725,696	+		Ga0059261_3607	0.12	-1.8
3,725,696	+		Ga0059261_3607	0.12	-0.6
3,725,696	+		Ga0059261_3607	0.12	+2.4
3,725,696	+		Ga0059261_3607	0.12	-0.1
3,725,697	-		Ga0059261_3607	0.12	-1.7
3,725,744	+		Ga0059261_3607	0.14	+0.1
3,725,783	+		Ga0059261_3607	0.16	-0.5
3,725,784	-		Ga0059261_3607	0.16	-1.3
3,725,817	-		Ga0059261_3607	0.17	-0.1
3,725,817	-		Ga0059261_3607	0.17	-1.7
3,725,981	+		Ga0059261_3607	0.24	+1.0
3,725,981	+		Ga0059261_3607	0.24	+1.0
3,725,981	+		Ga0059261_3607	0.24	+0.6
3,725,981	+		Ga0059261_3607	0.24	-0.7
3,725,981	+		Ga0059261_3607	0.24	+0.6
3,725,981	+		Ga0059261_3607	0.24	+0.2
3,725,982	-		Ga0059261_3607	0.24	+0.3
3,725,982	-		Ga0059261_3607	0.24	-0.1
3,726,009	+		Ga0059261_3607	0.25	-2.0
3,726,009	+		Ga0059261_3607	0.25	+0.2
3,726,009	+		Ga0059261_3607	0.25	-1.2
3,726,010	-		Ga0059261_3607	0.25	+0.0
3,726,010	-		Ga0059261_3607	0.25	+0.4
3,726,010	-		Ga0059261_3607	0.25	-1.3
3,726,010	-		Ga0059261_3607	0.25	-0.5
3,726,010	-		Ga0059261_3607	0.25	-0.5
3,726,010	-		Ga0059261_3607	0.25	-1.2
3,726,010	-		Ga0059261_3607	0.25	-0.1
3,726,010	-		Ga0059261_3607	0.25	-0.6
3,726,107	+		Ga0059261_3607	0.30	-0.3
3,726,107	+		Ga0059261_3607	0.30	-0.0
3,726,108	-		Ga0059261_3607	0.30	-2.0
3,726,108	-		Ga0059261_3607	0.30	+0.6
3,726,173	+		Ga0059261_3607	0.32	-2.2
3,726,173	+		Ga0059261_3607	0.32	+0.9
3,726,173	+		Ga0059261_3607	0.32	-2.1
3,726,173	+		Ga0059261_3607	0.32	+1.1
3,726,173	+		Ga0059261_3607	0.32	+0.2
3,726,173	+		Ga0059261_3607	0.32	+1.7
3,726,173	+				+1.2
3,726,174	-		Ga0059261_3607	0.32	-2.9
3,726,200	+		Ga0059261_3607	0.34	-0.2
3,726,200	+		Ga0059261_3607	0.34	+0.6
3,726,200	+		Ga0059261_3607	0.34	+1.8
3,726,200	+		Ga0059261_3607	0.34	+0.9
3,726,200	+		Ga0059261_3607	0.34	+1.3
3,726,218	+		Ga0059261_3607	0.34	-0.1
3,726,218	+		Ga0059261_3607	0.34	+0.6
3,726,284	+		Ga0059261_3607	0.37	+0.6
3,726,284	+		Ga0059261_3607	0.37	-0.9
3,726,284	+		Ga0059261_3607	0.37	+0.1
3,726,285	-		Ga0059261_3607	0.37	+0.5
3,726,285	-		Ga0059261_3607	0.37	+0.0
3,726,285	-		Ga0059261_3607	0.37	-2.4
3,726,285	-		Ga0059261_3607	0.37	+0.7
3,726,293	+		Ga0059261_3607	0.38	+0.8
3,726,293	+		Ga0059261_3607	0.38	-0.6
3,726,346	+		Ga0059261_3607	0.40	-1.0
3,726,346	+		Ga0059261_3607	0.40	-0.9
3,726,346	+		Ga0059261_3607	0.40	+0.1
3,726,347	-		Ga0059261_3607	0.40	-0.2
3,726,407	+		Ga0059261_3607	0.42	+1.0
3,726,407	+		Ga0059261_3607	0.42	+0.8
3,726,407	+		Ga0059261_3607	0.42	+1.0
3,726,408	-		Ga0059261_3607	0.42	+0.4
3,726,408	-		Ga0059261_3607	0.42	+1.9
3,726,408	-		Ga0059261_3607	0.42	+0.4
3,726,408	-		Ga0059261_3607	0.42	-0.5
3,726,408	-		Ga0059261_3607	0.42	-2.6
3,726,567	+		Ga0059261_3607	0.49	+0.2
3,726,567	+		Ga0059261_3607	0.49	-2.3
3,726,567	+		Ga0059261_3607	0.49	+2.3
3,726,567	+		Ga0059261_3607	0.49	+0.6
3,726,568	-		Ga0059261_3607	0.49	+0.1
3,726,568	-		Ga0059261_3607	0.49	-0.3
3,726,568	-		Ga0059261_3607	0.49	-1.5
3,726,683	+		Ga0059261_3607	0.54	+2.1
3,726,683	+		Ga0059261_3607	0.54	+0.3
3,726,684	-		Ga0059261_3607	0.54	+1.1
3,726,684	-		Ga0059261_3607	0.54	+0.7
3,726,684	-		Ga0059261_3607	0.54	-0.2
3,726,731	+		Ga0059261_3607	0.56	+0.4
3,726,731	+		Ga0059261_3607	0.56	-0.4
3,726,732	-		Ga0059261_3607	0.56	+0.5
3,726,735	+		Ga0059261_3607	0.56	+0.7
3,726,735	+				-1.5
3,726,735	+		Ga0059261_3607	0.56	+1.7
3,726,735	+		Ga0059261_3607	0.56	+0.7
3,726,735	+		Ga0059261_3607	0.56	+0.1
3,726,735	+		Ga0059261_3607	0.56	-0.4
3,726,735	+		Ga0059261_3607	0.56	-0.9
3,726,735	+		Ga0059261_3607	0.56	+0.6
3,726,735	+		Ga0059261_3607	0.56	+0.4
3,726,735	+		Ga0059261_3607	0.56	+0.1
3,726,735	+		Ga0059261_3607	0.56	+1.3
3,726,735	+		Ga0059261_3607	0.56	+0.0
3,726,735	+		Ga0059261_3607	0.56	+0.3
3,726,735	+		Ga0059261_3607	0.56	+0.5
3,726,735	+		Ga0059261_3607	0.56	+0.6
3,726,736	-		Ga0059261_3607	0.56	+0.6
3,726,736	-		Ga0059261_3607	0.56	-0.3
3,726,736	-		Ga0059261_3607	0.56	+0.2
3,726,736	-		Ga0059261_3607	0.56	+1.6
3,726,736	-		Ga0059261_3607	0.56	-0.1
3,726,736	-		Ga0059261_3607	0.56	-0.0
3,726,736	-		Ga0059261_3607	0.56	-0.8
3,726,736	-		Ga0059261_3607	0.56	-1.5
3,726,736	-		Ga0059261_3607	0.56	-3.8
3,726,736	-		Ga0059261_3607	0.56	-3.4
3,726,736	-		Ga0059261_3607	0.56	-0.4
3,726,743	+				+1.6
3,726,744	-		Ga0059261_3607	0.57	+0.0
3,726,744	-		Ga0059261_3607	0.57	+0.6
3,726,744	-		Ga0059261_3607	0.57	+0.0
3,726,770	+		Ga0059261_3607	0.58	+0.2
3,726,770	+		Ga0059261_3607	0.58	+0.5
3,726,770	+		Ga0059261_3607	0.58	+1.4
3,726,770	+		Ga0059261_3607	0.58	-2.5
3,726,771	-		Ga0059261_3607	0.58	-0.0
3,726,771	-		Ga0059261_3607	0.58	-1.0
3,726,771	-		Ga0059261_3607	0.58	+0.2
3,726,771	-		Ga0059261_3607	0.58	+0.7
3,726,771	-		Ga0059261_3607	0.58	-0.5
3,726,833	+		Ga0059261_3607	0.61	-0.1
3,726,833	+		Ga0059261_3607	0.61	-3.2
3,726,833	+		Ga0059261_3607	0.61	+0.6
3,726,833	+		Ga0059261_3607	0.61	+1.8
3,726,834	-		Ga0059261_3607	0.61	-1.1
3,726,834	-		Ga0059261_3607	0.61	+0.5
3,726,834	-		Ga0059261_3607	0.61	+0.6
3,726,959	+		Ga0059261_3607	0.66	+0.0
3,727,004	+		Ga0059261_3607	0.68	+0.6
3,727,004	+		Ga0059261_3607	0.68	+0.2
3,727,004	+		Ga0059261_3607	0.68	-3.4
3,727,004	+		Ga0059261_3607	0.68	+1.3
3,727,004	+		Ga0059261_3607	0.68	-1.1
3,727,004	+		Ga0059261_3607	0.68	+0.3
3,727,005	-		Ga0059261_3607	0.68	-2.6
3,727,005	-		Ga0059261_3607	0.68	+1.1
3,727,005	-		Ga0059261_3607	0.68	+0.1
3,727,005	-		Ga0059261_3607	0.68	-1.6
3,727,064	+		Ga0059261_3607	0.70	-0.4
3,727,065	-		Ga0059261_3607	0.70	-0.8
3,727,065	-		Ga0059261_3607	0.70	-0.1
3,727,065	-		Ga0059261_3607	0.70	+1.1
3,727,124	+		Ga0059261_3607	0.73	+1.0
3,727,124	+		Ga0059261_3607	0.73	+0.1
3,727,124	+		Ga0059261_3607	0.73	-0.8
3,727,124	+		Ga0059261_3607	0.73	+0.4
3,727,125	-		Ga0059261_3607	0.73	-0.4
3,727,125	-		Ga0059261_3607	0.73	+0.5
3,727,125	-		Ga0059261_3607	0.73	-1.4
3,727,289	+		Ga0059261_3607	0.80	-0.3
3,727,289	+		Ga0059261_3607	0.80	+0.8
3,727,289	+		Ga0059261_3607	0.80	+0.8
3,727,289	+		Ga0059261_3607	0.80	+1.6
3,727,290	-		Ga0059261_3607	0.80	+0.9
3,727,290	-		Ga0059261_3607	0.80	-0.8
3,727,290	-		Ga0059261_3607	0.80	-1.7
3,727,381	-		Ga0059261_3607	0.84	-2.0
3,727,381	-		Ga0059261_3607	0.84	+0.1
3,727,381	-		Ga0059261_3607	0.84	-0.6
3,727,418	+		Ga0059261_3607	0.86	-1.8
3,727,419	-		Ga0059261_3607	0.86	-0.8
3,727,517	+		Ga0059261_3607	0.90	-2.3
3,727,518	-		Ga0059261_3607	0.90	-4.2
3,727,518	-		Ga0059261_3607	0.90	-1.1
3,727,518	-		Ga0059261_3607	0.90	+2.1
3,727,595	+				-0.5
3,727,595	+				+0.9
3,727,595	+				+0.4
3,727,595	+				-4.0
3,727,595	+				-2.5
3,727,706	+				+0.2
3,727,706	+				-3.1
3,727,706	+				+0.6
3,727,706	+				-1.9
3,727,706	+				-0.2
3,727,754	+				+1.5
3,727,754	+				+1.0
3,727,755	-				-0.3
3,727,879	+				-1.9
3,727,880	-				-4.4
3,728,194	-				-1.5
3,728,194	-				-2.5
3,728,194	-				-3.8
3,728,194	-				-2.6
3,728,252	+		Ga0059261_3609	0.38	-1.9
3,728,252	+		Ga0059261_3609	0.38	-3.5
3,728,253	-		Ga0059261_3609	0.39	-3.4
3,728,253	-		Ga0059261_3609	0.39	-0.9
3,728,253	-		Ga0059261_3609	0.39	-1.8
3,728,253	-		Ga0059261_3609	0.39	-5.7
3,728,278	+		Ga0059261_3609	0.54	-3.8
3,728,278	+		Ga0059261_3609	0.54	-3.9
3,728,279	-		Ga0059261_3609	0.54	-0.6
3,728,279	-		Ga0059261_3609	0.54	-2.0
3,728,279	-		Ga0059261_3609	0.54	-4.1
3,728,414	+				+0.1
3,728,415	-				-1.4
3,728,415	-				-0.7
3,728,466	-				-0.0
3,728,466	-				-4.3
3,728,493	-				+0.5
3,728,520	-				+0.3
3,728,520	-				+1.5
3,728,520	-				-1.1
3,728,520	-				+0.1
3,728,540	+				+1.9
3,728,541	-				+1.3
3,728,586	+				-0.2
3,728,586	+				-1.1
3,728,587	-				+0.2
3,728,587	-				+0.9
3,728,587	-				+1.1
3,728,591	+				-3.1
3,728,591	+				+0.9
3,728,591	+				-0.4
3,728,591	+				+0.3
3,728,591	+				-0.4
3,728,591	+				-2.9
3,728,592	-				+0.1
3,728,592	-				+0.2
3,728,592	-				+1.8
3,728,592	-				-0.8
3,728,592	-				+0.5
3,728,592	-				-3.3
3,728,592	-				+0.3
3,728,592	-				+1.5
3,728,594	+				+0.1
3,728,594	+				-0.3
3,728,594	+				-2.1
3,728,594	+				-1.7
3,728,594	+				-0.3
3,728,595	-				-0.5
3,728,595	-				+1.5
3,728,595	-				+0.7
3,728,595	-				+1.8
3,728,595	-				-1.0
3,728,595	-				+0.7
3,728,595	-				+0.3
3,728,595	-				+1.0
3,728,595	-				-1.2
3,728,618	+				+0.0
3,728,618	+				-0.4
3,728,618	+				+0.7
3,728,618	+				-0.9
3,728,618	+				+0.2
3,728,618	+				+1.2
3,728,618	+				+0.6
3,728,618	+				-3.3
3,728,619	-				-0.5
3,728,619	-				+0.2
3,728,684	+				+0.0
3,728,685	-				+0.8
3,728,702	+				-0.6
3,728,702	+				+3.3
3,728,702	+				-1.3
3,728,703	-				+0.6
3,728,703	-				+1.5