Experiment: D-Glucose (C); no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0638 and Ga0059261_0639 are separated by 13 nucleotides Ga0059261_0639 and Ga0059261_0640 are separated by 180 nucleotides Ga0059261_0640 and Ga0059261_0641 are separated by 11 nucleotides Ga0059261_0641 and Ga0059261_0642 are separated by 17 nucleotides
Ga0059261_0638: Ga0059261_0638 - type I secretion outer membrane protein, TolC family, at 679,968 to 681,488
_0638
Ga0059261_0639: Ga0059261_0639 - Protein-L-isoaspartate carboxylmethyltransferase, at 681,502 to 682,161
_0639
Ga0059261_0640: Ga0059261_0640 - tRNA, at 682,342 to 682,415
_0640
Ga0059261_0641: Ga0059261_0641 - hypothetical protein, at 682,427 to 682,687
_0641
Ga0059261_0642: Ga0059261_0642 - Protein of unknown function (DUF3011), at 682,705 to 683,592
_0642
Position (kb) 682
683 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 682.204 kb on + strand at 682.230 kb on - strand at 682.230 kb on - strand at 682.248 kb on - strand at 682.754 kb on + strand at 682.754 kb on + strand at 682.754 kb on + strand at 682.754 kb on + strand at 682.754 kb on + strand at 682.754 kb on + strand at 682.754 kb on + strand at 682.755 kb on - strand at 682.755 kb on - strand at 682.755 kb on - strand at 682.755 kb on - strand at 682.785 kb on - strand at 682.985 kb on + strand, within Ga0059261_0642 at 682.985 kb on + strand, within Ga0059261_0642 at 682.986 kb on - strand, within Ga0059261_0642 at 682.986 kb on - strand, within Ga0059261_0642 at 682.986 kb on - strand, within Ga0059261_0642 at 682.986 kb on - strand, within Ga0059261_0642 at 683.150 kb on + strand, within Ga0059261_0642 at 683.151 kb on - strand, within Ga0059261_0642 at 683.151 kb on - strand, within Ga0059261_0642 at 683.156 kb on + strand, within Ga0059261_0642 at 683.204 kb on + strand at 683.204 kb on + strand, within Ga0059261_0642 at 683.205 kb on - strand, within Ga0059261_0642 at 683.205 kb on - strand, within Ga0059261_0642 at 683.205 kb on - strand, within Ga0059261_0642 at 683.286 kb on - strand, within Ga0059261_0642 at 683.366 kb on + strand, within Ga0059261_0642 at 683.644 kb on + strand at 683.644 kb on + strand at 683.644 kb on + strand at 683.645 kb on - strand at 683.645 kb on - strand at 683.645 kb on - strand at 683.645 kb on - strand at 683.645 kb on - strand at 683.645 kb on - strand at 683.646 kb on + strand at 683.646 kb on + strand at 683.647 kb on - strand at 683.647 kb on - strand at 683.647 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); no added vitamins remove 682,204 + -1.9 682,230 - +0.8 682,230 - +0.4 682,248 - +2.0 682,754 + +0.1 682,754 + -1.1 682,754 + -2.0 682,754 + +0.8 682,754 + -0.6 682,754 + +0.5 682,754 + +0.8 682,755 - -0.1 682,755 - +0.4 682,755 - +0.5 682,755 - +1.8 682,785 - -0.6 682,985 + Ga0059261_0642 0.32 -2.2 682,985 + Ga0059261_0642 0.32 -0.7 682,986 - Ga0059261_0642 0.32 +1.3 682,986 - Ga0059261_0642 0.32 +1.2 682,986 - Ga0059261_0642 0.32 -3.6 682,986 - Ga0059261_0642 0.32 -0.6 683,150 + Ga0059261_0642 0.50 -0.4 683,151 - Ga0059261_0642 0.50 -1.1 683,151 - Ga0059261_0642 0.50 -0.5 683,156 + Ga0059261_0642 0.51 +0.3 683,204 + +3.2 683,204 + Ga0059261_0642 0.56 -0.9 683,205 - Ga0059261_0642 0.56 -0.7 683,205 - Ga0059261_0642 0.56 -0.3 683,205 - Ga0059261_0642 0.56 -0.5 683,286 - Ga0059261_0642 0.65 +0.2 683,366 + Ga0059261_0642 0.74 +1.1 683,644 + +1.3 683,644 + +0.4 683,644 + -0.1 683,645 - +0.4 683,645 - +1.7 683,645 - -0.7 683,645 - -0.1 683,645 - +0.6 683,645 - +0.7 683,646 + +1.1 683,646 + -1.4 683,647 - -0.2 683,647 - +1.5 683,647 - +0.1
Or see this region's nucleotide sequence