Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26720 and BWI76_RS26725 are separated by 119 nucleotides BWI76_RS26725 and BWI76_RS26730 are separated by 250 nucleotides
BWI76_RS26720: BWI76_RS26720 - short-chain dehydrogenase/reductase SDR, at 5,532,695 to 5,533,453
_RS26720
BWI76_RS26725: BWI76_RS26725 - LysR family transcriptional regulator, at 5,533,573 to 5,534,472
_RS26725
BWI76_RS26730: BWI76_RS26730 - inner membrane protein YhjD, at 5,534,723 to 5,535,754
_RS26730
Position (kb)
5533
5534
5535 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 5532.593 kb on + strand at 5532.613 kb on - strand at 5532.628 kb on + strand at 5532.628 kb on + strand at 5532.628 kb on + strand at 5532.630 kb on + strand at 5532.655 kb on - strand at 5532.659 kb on + strand at 5532.664 kb on + strand at 5532.672 kb on - strand at 5532.672 kb on - strand at 5532.672 kb on - strand at 5532.672 kb on - strand at 5532.674 kb on + strand at 5532.683 kb on - strand at 5532.691 kb on - strand at 5532.710 kb on + strand at 5532.710 kb on + strand at 5532.718 kb on + strand at 5532.726 kb on - strand at 5532.726 kb on - strand at 5532.726 kb on - strand at 5532.726 kb on - strand at 5532.748 kb on + strand at 5532.748 kb on + strand at 5532.751 kb on - strand at 5532.751 kb on - strand at 5532.751 kb on - strand at 5532.756 kb on - strand at 5532.796 kb on + strand, within BWI76_RS26720 at 5532.801 kb on + strand, within BWI76_RS26720 at 5532.804 kb on - strand, within BWI76_RS26720 at 5532.809 kb on - strand, within BWI76_RS26720 at 5532.809 kb on - strand, within BWI76_RS26720 at 5532.846 kb on + strand, within BWI76_RS26720 at 5532.854 kb on - strand, within BWI76_RS26720 at 5532.854 kb on - strand, within BWI76_RS26720 at 5532.980 kb on + strand, within BWI76_RS26720 at 5532.988 kb on - strand, within BWI76_RS26720 at 5533.070 kb on + strand, within BWI76_RS26720 at 5533.092 kb on + strand, within BWI76_RS26720 at 5533.162 kb on - strand, within BWI76_RS26720 at 5533.232 kb on + strand at 5533.599 kb on + strand at 5533.607 kb on - strand at 5533.610 kb on - strand at 5533.610 kb on - strand at 5533.646 kb on + strand at 5533.654 kb on - strand at 5533.654 kb on - strand at 5533.700 kb on + strand, within BWI76_RS26725 at 5533.755 kb on - strand, within BWI76_RS26725 at 5533.778 kb on + strand, within BWI76_RS26725 at 5533.804 kb on - strand, within BWI76_RS26725 at 5533.818 kb on + strand, within BWI76_RS26725 at 5533.826 kb on - strand, within BWI76_RS26725 at 5533.840 kb on - strand, within BWI76_RS26725 at 5533.937 kb on + strand, within BWI76_RS26725 at 5533.984 kb on + strand, within BWI76_RS26725 at 5533.984 kb on + strand, within BWI76_RS26725 at 5533.992 kb on - strand, within BWI76_RS26725 at 5533.992 kb on - strand, within BWI76_RS26725 at 5534.021 kb on + strand, within BWI76_RS26725 at 5534.067 kb on - strand, within BWI76_RS26725 at 5534.177 kb on + strand, within BWI76_RS26725 at 5534.177 kb on + strand, within BWI76_RS26725 at 5534.393 kb on - strand at 5534.430 kb on - strand at 5534.430 kb on - strand at 5534.531 kb on - strand at 5534.589 kb on + strand at 5534.597 kb on - strand at 5534.597 kb on - strand at 5534.753 kb on + strand at 5534.811 kb on + strand at 5534.883 kb on + strand, within BWI76_RS26730 at 5534.884 kb on + strand at 5535.139 kb on + strand, within BWI76_RS26730 at 5535.139 kb on + strand, within BWI76_RS26730 at 5535.247 kb on - strand, within BWI76_RS26730 at 5535.328 kb on + strand, within BWI76_RS26730 at 5535.328 kb on + strand, within BWI76_RS26730 at 5535.336 kb on - strand, within BWI76_RS26730 at 5535.388 kb on + strand, within BWI76_RS26730 at 5535.412 kb on + strand, within BWI76_RS26730
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 5,532,593 + -0.7 5,532,613 - -0.2 5,532,628 + +2.0 5,532,628 + -0.0 5,532,628 + +0.2 5,532,630 + -0.1 5,532,655 - +0.4 5,532,659 + +0.1 5,532,664 + +0.7 5,532,672 - +0.1 5,532,672 - -1.0 5,532,672 - +0.6 5,532,672 - +1.4 5,532,674 + -0.0 5,532,683 - -0.0 5,532,691 - +0.5 5,532,710 + -1.3 5,532,710 + +0.4 5,532,718 + -0.7 5,532,726 - -0.3 5,532,726 - -0.8 5,532,726 - -1.3 5,532,726 - -1.0 5,532,748 + -1.6 5,532,748 + -0.4 5,532,751 - +0.5 5,532,751 - -0.1 5,532,751 - -0.1 5,532,756 - -0.1 5,532,796 + BWI76_RS26720 0.13 -0.3 5,532,801 + BWI76_RS26720 0.14 -0.4 5,532,804 - BWI76_RS26720 0.14 +0.1 5,532,809 - BWI76_RS26720 0.15 +1.3 5,532,809 - BWI76_RS26720 0.15 +0.4 5,532,846 + BWI76_RS26720 0.20 -0.6 5,532,854 - BWI76_RS26720 0.21 -0.1 5,532,854 - BWI76_RS26720 0.21 -0.1 5,532,980 + BWI76_RS26720 0.38 -1.0 5,532,988 - BWI76_RS26720 0.39 -0.1 5,533,070 + BWI76_RS26720 0.49 -0.2 5,533,092 + BWI76_RS26720 0.52 -0.3 5,533,162 - BWI76_RS26720 0.62 +0.4 5,533,232 + +4.0 5,533,599 + -0.2 5,533,607 - +0.9 5,533,610 - -0.3 5,533,610 - +0.4 5,533,646 + +0.2 5,533,654 - -0.3 5,533,654 - -0.3 5,533,700 + BWI76_RS26725 0.14 +0.1 5,533,755 - BWI76_RS26725 0.20 +0.1 5,533,778 + BWI76_RS26725 0.23 -0.6 5,533,804 - BWI76_RS26725 0.26 +0.6 5,533,818 + BWI76_RS26725 0.27 -0.0 5,533,826 - BWI76_RS26725 0.28 -0.3 5,533,840 - BWI76_RS26725 0.30 -0.3 5,533,937 + BWI76_RS26725 0.40 -0.1 5,533,984 + BWI76_RS26725 0.46 +1.4 5,533,984 + BWI76_RS26725 0.46 +0.3 5,533,992 - BWI76_RS26725 0.47 -0.2 5,533,992 - BWI76_RS26725 0.47 -0.5 5,534,021 + BWI76_RS26725 0.50 -0.0 5,534,067 - BWI76_RS26725 0.55 -0.3 5,534,177 + BWI76_RS26725 0.67 -0.2 5,534,177 + BWI76_RS26725 0.67 +0.1 5,534,393 - -0.1 5,534,430 - +0.1 5,534,430 - +0.4 5,534,531 - -0.0 5,534,589 + -2.0 5,534,597 - +0.4 5,534,597 - -0.3 5,534,753 + +1.1 5,534,811 + -0.3 5,534,883 + BWI76_RS26730 0.16 -1.0 5,534,884 + +1.4 5,535,139 + BWI76_RS26730 0.40 +0.6 5,535,139 + BWI76_RS26730 0.40 -0.9 5,535,247 - BWI76_RS26730 0.51 +0.3 5,535,328 + BWI76_RS26730 0.59 -0.6 5,535,328 + BWI76_RS26730 0.59 +2.8 5,535,336 - BWI76_RS26730 0.59 -0.4 5,535,388 + BWI76_RS26730 0.64 +0.3 5,535,412 + BWI76_RS26730 0.67 +0.6
Or see this region's nucleotide sequence