Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24330 and BWI76_RS24335 are separated by 151 nucleotides BWI76_RS24335 and BWI76_RS24340 overlap by 4 nucleotides BWI76_RS24340 and BWI76_RS24345 are separated by 106 nucleotides BWI76_RS24345 and BWI76_RS24350 are separated by 90 nucleotides
BWI76_RS24330: BWI76_RS24330 - TIGR00156 family protein, at 5,071,788 to 5,072,195
_RS24330
BWI76_RS24335: BWI76_RS24335 - two-component system response regulator QseB, at 5,072,347 to 5,073,006
_RS24335
BWI76_RS24340: BWI76_RS24340 - two-component sensor histidine kinase, at 5,073,003 to 5,074,352
_RS24340
BWI76_RS24345: BWI76_RS24345 - NADPH quinone reductase MdaB, at 5,074,459 to 5,075,040
_RS24345
BWI76_RS24350: BWI76_RS24350 - quinol monooxygenase, at 5,075,131 to 5,075,445
_RS24350
Position (kb) 5073
5074
5075 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5072.137 kb on - strand, within BWI76_RS24330 at 5072.214 kb on - strand at 5072.227 kb on + strand at 5072.227 kb on + strand at 5072.227 kb on + strand at 5072.235 kb on - strand at 5072.235 kb on - strand at 5072.235 kb on - strand at 5072.235 kb on - strand at 5072.440 kb on - strand, within BWI76_RS24335 at 5072.466 kb on + strand, within BWI76_RS24335 at 5072.474 kb on - strand, within BWI76_RS24335 at 5072.474 kb on - strand, within BWI76_RS24335 at 5072.725 kb on - strand, within BWI76_RS24335 at 5072.765 kb on + strand, within BWI76_RS24335 at 5072.907 kb on - strand, within BWI76_RS24335 at 5072.927 kb on + strand, within BWI76_RS24335 at 5072.927 kb on + strand, within BWI76_RS24335 at 5072.979 kb on - strand at 5072.989 kb on + strand at 5072.992 kb on - strand at 5072.992 kb on - strand at 5073.112 kb on + strand at 5073.112 kb on - strand at 5073.263 kb on - strand, within BWI76_RS24340 at 5073.492 kb on - strand, within BWI76_RS24340 at 5073.499 kb on - strand, within BWI76_RS24340 at 5073.667 kb on + strand, within BWI76_RS24340 at 5073.744 kb on - strand, within BWI76_RS24340 at 5073.977 kb on + strand, within BWI76_RS24340 at 5073.997 kb on + strand, within BWI76_RS24340 at 5074.005 kb on - strand, within BWI76_RS24340 at 5074.063 kb on + strand, within BWI76_RS24340 at 5074.134 kb on - strand, within BWI76_RS24340 at 5074.196 kb on - strand, within BWI76_RS24340 at 5074.257 kb on - strand at 5074.257 kb on - strand at 5074.259 kb on + strand at 5074.314 kb on + strand at 5074.571 kb on + strand, within BWI76_RS24345 at 5074.725 kb on - strand, within BWI76_RS24345 at 5074.743 kb on - strand, within BWI76_RS24345 at 5074.830 kb on - strand, within BWI76_RS24345 at 5074.919 kb on - strand, within BWI76_RS24345 at 5075.040 kb on + strand at 5075.040 kb on + strand at 5075.051 kb on - strand at 5075.132 kb on + strand at 5075.175 kb on - strand, within BWI76_RS24350
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 5,072,137 - BWI76_RS24330 0.86 +0.6 5,072,214 - +1.1 5,072,227 + +0.1 5,072,227 + +0.5 5,072,227 + +0.2 5,072,235 - -0.5 5,072,235 - -0.1 5,072,235 - -0.8 5,072,235 - -0.1 5,072,440 - BWI76_RS24335 0.14 +0.1 5,072,466 + BWI76_RS24335 0.18 -0.1 5,072,474 - BWI76_RS24335 0.19 -0.9 5,072,474 - BWI76_RS24335 0.19 -0.3 5,072,725 - BWI76_RS24335 0.57 +0.5 5,072,765 + BWI76_RS24335 0.63 -0.4 5,072,907 - BWI76_RS24335 0.85 -0.4 5,072,927 + BWI76_RS24335 0.88 +0.6 5,072,927 + BWI76_RS24335 0.88 +0.6 5,072,979 - -0.3 5,072,989 + +1.9 5,072,992 - +0.0 5,072,992 - -0.6 5,073,112 + -1.2 5,073,112 - -0.9 5,073,263 - BWI76_RS24340 0.19 -0.7 5,073,492 - BWI76_RS24340 0.36 -0.2 5,073,499 - BWI76_RS24340 0.37 -0.1 5,073,667 + BWI76_RS24340 0.49 -2.4 5,073,744 - BWI76_RS24340 0.55 -1.6 5,073,977 + BWI76_RS24340 0.72 -1.6 5,073,997 + BWI76_RS24340 0.74 -0.9 5,074,005 - BWI76_RS24340 0.74 -2.3 5,074,063 + BWI76_RS24340 0.79 -1.7 5,074,134 - BWI76_RS24340 0.84 -1.2 5,074,196 - BWI76_RS24340 0.88 -0.9 5,074,257 - -0.7 5,074,257 - +0.0 5,074,259 + -0.9 5,074,314 + -1.5 5,074,571 + BWI76_RS24345 0.19 +0.0 5,074,725 - BWI76_RS24345 0.46 -0.4 5,074,743 - BWI76_RS24345 0.49 +0.5 5,074,830 - BWI76_RS24345 0.64 +0.2 5,074,919 - BWI76_RS24345 0.79 -2.0 5,075,040 + +0.5 5,075,040 + +1.2 5,075,051 - +0.4 5,075,132 + +0.0 5,075,175 - BWI76_RS24350 0.14 -0.2
Or see this region's nucleotide sequence