Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23540

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23530 and BWI76_RS23535 are separated by 83 nucleotidesBWI76_RS23535 and BWI76_RS23540 are separated by 149 nucleotidesBWI76_RS23540 and BWI76_RS23545 are separated by 534 nucleotides BWI76_RS23530: BWI76_RS23530 - MarR family transcriptional regulator, at 4,908,510 to 4,909,016 _RS23530 BWI76_RS23535: BWI76_RS23535 - hypothetical protein, at 4,909,100 to 4,909,561 _RS23535 BWI76_RS23540: BWI76_RS23540 - putative lysine exporter protein, at 4,909,711 to 4,910,322 _RS23540 BWI76_RS23545: BWI76_RS23545 - tyrosine recombinase, at 4,910,857 to 4,911,462 _RS23545 Position (kb) 4909 4910 4911Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4908.742 kb on - strand, within BWI76_RS23530at 4908.880 kb on + strand, within BWI76_RS23530at 4908.987 kb on + strandat 4909.019 kb on - strandat 4909.091 kb on + strandat 4909.099 kb on - strandat 4909.161 kb on - strand, within BWI76_RS23535at 4909.193 kb on - strand, within BWI76_RS23535at 4909.247 kb on - strand, within BWI76_RS23535at 4909.692 kb on + strandat 4909.705 kb on - strandat 4909.705 kb on - strandat 4909.705 kb on - strandat 4909.783 kb on + strand, within BWI76_RS23540at 4910.010 kb on - strand, within BWI76_RS23540at 4910.046 kb on - strand, within BWI76_RS23540at 4910.130 kb on + strand, within BWI76_RS23540at 4910.170 kb on - strand, within BWI76_RS23540at 4910.187 kb on + strand, within BWI76_RS23540at 4910.262 kb on + strandat 4910.291 kb on + strandat 4910.301 kb on - strandat 4910.313 kb on + strandat 4910.313 kb on + strandat 4910.328 kb on + strandat 4910.328 kb on + strandat 4910.329 kb on + strandat 4910.329 kb on + strandat 4910.329 kb on + strandat 4910.329 kb on + strandat 4910.329 kb on + strandat 4910.329 kb on + strandat 4910.329 kb on + strandat 4910.329 kb on + strandat 4910.336 kb on - strandat 4910.336 kb on - strandat 4910.336 kb on - strandat 4910.337 kb on - strandat 4910.337 kb on - strandat 4910.337 kb on - strandat 4910.348 kb on + strandat 4910.353 kb on + strandat 4910.353 kb on + strandat 4910.356 kb on - strandat 4910.361 kb on - strandat 4910.361 kb on - strandat 4910.361 kb on - strandat 4910.361 kb on - strandat 4910.361 kb on - strandat 4910.361 kb on - strandat 4910.361 kb on - strandat 4910.417 kb on - strandat 4910.417 kb on - strandat 4910.417 kb on - strandat 4910.417 kb on - strandat 4910.417 kb on - strandat 4910.417 kb on - strandat 4910.421 kb on + strandat 4910.429 kb on - strandat 4910.429 kb on - strandat 4910.429 kb on - strandat 4910.433 kb on - strandat 4910.439 kb on - strandat 4910.445 kb on + strandat 4910.445 kb on + strandat 4910.450 kb on - strandat 4910.453 kb on + strandat 4910.458 kb on - strandat 4910.488 kb on + strandat 4910.488 kb on + strandat 4910.495 kb on - strandat 4910.496 kb on - strandat 4910.498 kb on + strandat 4910.516 kb on - strandat 4910.516 kb on - strandat 4910.516 kb on - strandat 4910.521 kb on - strandat 4910.521 kb on - strandat 4910.521 kb on - strandat 4910.521 kb on - strandat 4910.541 kb on - strandat 4910.584 kb on - strandat 4910.615 kb on + strandat 4910.623 kb on + strandat 4910.623 kb on + strandat 4910.623 kb on + strandat 4910.631 kb on - strandat 4910.631 kb on - strandat 4910.631 kb on - strandat 4910.633 kb on + strandat 4910.633 kb on + strandat 4910.633 kb on + strandat 4910.641 kb on - strandat 4910.641 kb on - strandat 4910.641 kb on - strandat 4910.641 kb on - strandat 4910.667 kb on + strandat 4910.667 kb on + strandat 4910.667 kb on + strandat 4910.667 kb on + strandat 4910.667 kb on + strandat 4910.667 kb on + strandat 4910.667 kb on + strandat 4910.667 kb on + strandat 4910.667 kb on + strandat 4910.667 kb on + strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.675 kb on - strandat 4910.677 kb on - strandat 4910.680 kb on + strandat 4910.680 kb on + strandat 4910.680 kb on + strandat 4910.680 kb on + strandat 4910.688 kb on + strandat 4910.688 kb on + strandat 4910.688 kb on - strandat 4910.688 kb on - strandat 4910.688 kb on - strandat 4910.688 kb on - strandat 4910.697 kb on - strandat 4910.713 kb on + strandat 4910.721 kb on + strandat 4910.792 kb on + strandat 4910.800 kb on - strandat 4910.800 kb on - strandat 4910.800 kb on - strandat 4910.801 kb on - strandat 4910.813 kb on - strandat 4910.846 kb on - strandat 4910.914 kb on - strandat 4910.926 kb on + strand, within BWI76_RS23545at 4910.927 kb on - strand, within BWI76_RS23545at 4910.933 kb on + strand, within BWI76_RS23545at 4910.934 kb on - strand, within BWI76_RS23545at 4910.934 kb on - strand, within BWI76_RS23545at 4910.936 kb on - strand, within BWI76_RS23545at 4910.936 kb on - strand, within BWI76_RS23545at 4910.936 kb on - strand, within BWI76_RS23545at 4910.936 kb on - strand, within BWI76_RS23545at 4910.937 kb on - strand, within BWI76_RS23545at 4910.937 kb on - strand, within BWI76_RS23545at 4910.937 kb on - strand, within BWI76_RS23545at 4910.937 kb on - strand, within BWI76_RS23545at 4910.947 kb on - strand, within BWI76_RS23545at 4910.952 kb on - strand, within BWI76_RS23545at 4911.049 kb on - strand, within BWI76_RS23545at 4911.049 kb on - strand, within BWI76_RS23545at 4911.051 kb on + strand, within BWI76_RS23545at 4911.051 kb on + strand, within BWI76_RS23545at 4911.059 kb on - strand, within BWI76_RS23545at 4911.131 kb on + strand, within BWI76_RS23545at 4911.138 kb on + strand, within BWI76_RS23545at 4911.138 kb on + strand, within BWI76_RS23545at 4911.139 kb on - strand, within BWI76_RS23545at 4911.153 kb on + strand, within BWI76_RS23545at 4911.153 kb on + strand, within BWI76_RS23545at 4911.161 kb on - strand, within BWI76_RS23545at 4911.167 kb on + strand, within BWI76_RS23545at 4911.182 kb on - strand, within BWI76_RS23545at 4911.192 kb on + strand, within BWI76_RS23545at 4911.192 kb on + strand, within BWI76_RS23545at 4911.193 kb on + strand, within BWI76_RS23545at 4911.207 kb on - strand, within BWI76_RS23545at 4911.266 kb on + strand, within BWI76_RS23545at 4911.266 kb on + strand, within BWI76_RS23545at 4911.274 kb on - strand, within BWI76_RS23545at 4911.274 kb on - strand, within BWI76_RS23545at 4911.277 kb on + strand, within BWI76_RS23545at 4911.277 kb on + strand, within BWI76_RS23545at 4911.277 kb on + strand, within BWI76_RS23545at 4911.285 kb on - strand, within BWI76_RS23545at 4911.285 kb on - strandat 4911.288 kb on + strand, within BWI76_RS23545at 4911.296 kb on - strand, within BWI76_RS23545at 4911.299 kb on + strand, within BWI76_RS23545at 4911.299 kb on + strand, within BWI76_RS23545at 4911.299 kb on + strand, within BWI76_RS23545at 4911.299 kb on + strand, within BWI76_RS23545at 4911.299 kb on + strand, within BWI76_RS23545at 4911.299 kb on + strand, within BWI76_RS23545at 4911.299 kb on + strand, within BWI76_RS23545at 4911.299 kb on + strand, within BWI76_RS23545at 4911.304 kb on + strand, within BWI76_RS23545at 4911.306 kb on - strand, within BWI76_RS23545at 4911.307 kb on - strand, within BWI76_RS23545at 4911.307 kb on - strand, within BWI76_RS23545at 4911.312 kb on - strand, within BWI76_RS23545at 4911.318 kb on - strand, within BWI76_RS23545

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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4,908,742 - BWI76_RS23530 0.46 +0.4
4,908,880 + BWI76_RS23530 0.73 +2.3
4,908,987 + +0.9
4,909,019 - +0.2
4,909,091 + +1.4
4,909,099 - -0.2
4,909,161 - BWI76_RS23535 0.13 +1.4
4,909,193 - BWI76_RS23535 0.20 +1.6
4,909,247 - BWI76_RS23535 0.32 +1.8
4,909,692 + +1.9
4,909,705 - +1.9
4,909,705 - +1.5
4,909,705 - +0.0
4,909,783 + BWI76_RS23540 0.12 +1.6
4,910,010 - BWI76_RS23540 0.49 +0.7
4,910,046 - BWI76_RS23540 0.55 +1.3
4,910,130 + BWI76_RS23540 0.68 +1.6
4,910,170 - BWI76_RS23540 0.75 +1.2
4,910,187 + BWI76_RS23540 0.78 +1.6
4,910,262 + +1.6
4,910,291 + +1.7
4,910,301 - +1.3
4,910,313 + +1.6
4,910,313 + +1.5
4,910,328 + +0.5
4,910,328 + -0.0
4,910,329 + -0.0
4,910,329 + +0.2
4,910,329 + +0.8
4,910,329 + +0.7
4,910,329 + -0.1
4,910,329 + +0.6
4,910,329 + -0.1
4,910,329 + +0.4
4,910,336 - +2.4
4,910,336 - +1.6
4,910,336 - +0.2
4,910,337 - -0.9
4,910,337 - -0.0
4,910,337 - -0.4
4,910,348 + +0.4
4,910,353 + -0.6
4,910,353 + -0.1
4,910,356 - +0.3
4,910,361 - +0.1
4,910,361 - +0.3
4,910,361 - -0.0
4,910,361 - +0.6
4,910,361 - +0.8
4,910,361 - -0.1
4,910,361 - -0.5
4,910,417 - +1.0
4,910,417 - +0.4
4,910,417 - +0.3
4,910,417 - -0.1
4,910,417 - +0.8
4,910,417 - -0.3
4,910,421 + +0.1
4,910,429 - +0.5
4,910,429 - -0.5
4,910,429 - -1.1
4,910,433 - +0.3
4,910,439 - -0.4
4,910,445 + -0.5
4,910,445 + +0.1
4,910,450 - -0.4
4,910,453 + +1.0
4,910,458 - +0.8
4,910,488 + -0.6
4,910,488 + -1.3
4,910,495 - +1.4
4,910,496 - +2.8
4,910,498 + -1.2
4,910,516 - +0.8
4,910,516 - -1.0
4,910,516 - +1.0
4,910,521 - +0.4
4,910,521 - +1.2
4,910,521 - -0.5
4,910,521 - -0.6
4,910,541 - +0.6
4,910,584 - +0.5
4,910,615 + -1.0
4,910,623 + +0.4
4,910,623 + +0.3
4,910,623 + -0.3
4,910,631 - -1.0
4,910,631 - -0.2
4,910,631 - +1.8
4,910,633 + +0.3
4,910,633 + -0.4
4,910,633 + +0.0
4,910,641 - +0.8
4,910,641 - +0.2
4,910,641 - -0.8
4,910,641 - +0.6
4,910,667 + -1.3
4,910,667 + +0.2
4,910,667 + +0.7
4,910,667 + -0.9
4,910,667 + -0.8
4,910,667 + +0.6
4,910,667 + -0.0
4,910,667 + -0.2
4,910,667 + +0.3
4,910,667 + -1.2
4,910,675 - +0.3
4,910,675 - -1.5
4,910,675 - -0.3
4,910,675 - -0.3
4,910,675 - -0.4
4,910,675 - -0.2
4,910,675 - -0.4
4,910,675 - -0.1
4,910,675 - +0.2
4,910,675 - -0.1
4,910,675 - -0.0
4,910,677 - -0.2
4,910,680 + +0.7
4,910,680 + -1.3
4,910,680 + +0.8
4,910,680 + +0.8
4,910,688 + +0.1
4,910,688 + +0.2
4,910,688 - -0.4
4,910,688 - -0.2
4,910,688 - +0.4
4,910,688 - -0.5
4,910,697 - -1.2
4,910,713 + -0.5
4,910,721 + +0.6
4,910,792 + -1.9
4,910,800 - -1.0
4,910,800 - +2.8
4,910,800 - +1.5
4,910,801 - -0.5
4,910,813 - -1.8
4,910,846 - +0.8
4,910,914 - -0.2
4,910,926 + BWI76_RS23545 0.11 -2.2
4,910,927 - BWI76_RS23545 0.12 -0.1
4,910,933 + BWI76_RS23545 0.13 -0.1
4,910,934 - BWI76_RS23545 0.13 +0.7
4,910,934 - BWI76_RS23545 0.13 -1.1
4,910,936 - BWI76_RS23545 0.13 -4.1
4,910,936 - BWI76_RS23545 0.13 -2.3
4,910,936 - BWI76_RS23545 0.13 -0.6
4,910,936 - BWI76_RS23545 0.13 +1.5
4,910,937 - BWI76_RS23545 0.13 -1.6
4,910,937 - BWI76_RS23545 0.13 +0.5
4,910,937 - BWI76_RS23545 0.13 +0.1
4,910,937 - BWI76_RS23545 0.13 -1.8
4,910,947 - BWI76_RS23545 0.15 -0.2
4,910,952 - BWI76_RS23545 0.16 +1.2
4,911,049 - BWI76_RS23545 0.32 -0.3
4,911,049 - BWI76_RS23545 0.32 -0.7
4,911,051 + BWI76_RS23545 0.32 -0.5
4,911,051 + BWI76_RS23545 0.32 -0.2
4,911,059 - BWI76_RS23545 0.33 +0.0
4,911,131 + BWI76_RS23545 0.45 -2.5
4,911,138 + BWI76_RS23545 0.46 +0.2
4,911,138 + BWI76_RS23545 0.46 +0.5
4,911,139 - BWI76_RS23545 0.47 -0.1
4,911,153 + BWI76_RS23545 0.49 -2.8
4,911,153 + BWI76_RS23545 0.49 -0.0
4,911,161 - BWI76_RS23545 0.50 -0.2
4,911,167 + BWI76_RS23545 0.51 +0.1
4,911,182 - BWI76_RS23545 0.54 -1.2
4,911,192 + BWI76_RS23545 0.55 +1.2
4,911,192 + BWI76_RS23545 0.55 +0.4
4,911,193 + BWI76_RS23545 0.55 +0.0
4,911,207 - BWI76_RS23545 0.58 -1.9
4,911,266 + BWI76_RS23545 0.67 -0.9
4,911,266 + BWI76_RS23545 0.67 -0.1
4,911,274 - BWI76_RS23545 0.69 -1.2
4,911,274 - BWI76_RS23545 0.69 -0.3
4,911,277 + BWI76_RS23545 0.69 -0.1
4,911,277 + BWI76_RS23545 0.69 +0.8
4,911,277 + BWI76_RS23545 0.69 +0.8
4,911,285 - BWI76_RS23545 0.71 +0.9
4,911,285 - +1.8
4,911,288 + BWI76_RS23545 0.71 -0.8
4,911,296 - BWI76_RS23545 0.72 +0.2
4,911,299 + BWI76_RS23545 0.73 +0.9
4,911,299 + BWI76_RS23545 0.73 +0.7
4,911,299 + BWI76_RS23545 0.73 +1.1
4,911,299 + BWI76_RS23545 0.73 +0.8
4,911,299 + BWI76_RS23545 0.73 -0.2
4,911,299 + BWI76_RS23545 0.73 -0.1
4,911,299 + BWI76_RS23545 0.73 +0.7
4,911,299 + BWI76_RS23545 0.73 -0.3
4,911,304 + BWI76_RS23545 0.74 -0.4
4,911,306 - BWI76_RS23545 0.74 +0.8
4,911,307 - BWI76_RS23545 0.74 -1.4
4,911,307 - BWI76_RS23545 0.74 -0.3
4,911,312 - BWI76_RS23545 0.75 -0.8
4,911,318 - BWI76_RS23545 0.76 +1.4

Or see this region's nucleotide sequence