Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08440 and BWI76_RS08445 are separated by 185 nucleotides BWI76_RS08445 and BWI76_RS08450 are separated by 9 nucleotides BWI76_RS08450 and BWI76_RS08455 are separated by 11 nucleotides
BWI76_RS08440: BWI76_RS08440 - hypothetical protein, at 1,786,734 to 1,787,636
_RS08440
BWI76_RS08445: BWI76_RS08445 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 1,787,822 to 1,788,424
_RS08445
BWI76_RS08450: BWI76_RS08450 - fumarate hydratase, at 1,788,434 to 1,790,086
_RS08450
BWI76_RS08455: BWI76_RS08455 - glutaminase, at 1,790,098 to 1,791,099
_RS08455
Position (kb)
1788
1789
1790
1791 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1787.614 kb on + strand at 1787.792 kb on - strand at 1787.913 kb on - strand, within BWI76_RS08445 at 1788.016 kb on + strand, within BWI76_RS08445 at 1788.018 kb on + strand, within BWI76_RS08445 at 1788.026 kb on - strand, within BWI76_RS08445 at 1788.186 kb on + strand, within BWI76_RS08445 at 1788.221 kb on - strand, within BWI76_RS08445 at 1788.280 kb on - strand, within BWI76_RS08445 at 1788.432 kb on + strand at 1788.585 kb on - strand at 1788.646 kb on + strand, within BWI76_RS08450 at 1788.761 kb on - strand, within BWI76_RS08450 at 1789.050 kb on + strand, within BWI76_RS08450 at 1789.139 kb on + strand, within BWI76_RS08450 at 1789.254 kb on + strand at 1789.254 kb on + strand, within BWI76_RS08450 at 1789.496 kb on - strand, within BWI76_RS08450 at 1789.680 kb on + strand, within BWI76_RS08450 at 1790.600 kb on + strand, within BWI76_RS08455 at 1790.609 kb on - strand, within BWI76_RS08455 at 1790.811 kb on + strand, within BWI76_RS08455 at 1790.930 kb on - strand, within BWI76_RS08455 at 1790.942 kb on + strand, within BWI76_RS08455 at 1791.044 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,787,614 + -0.4 1,787,792 - -0.9 1,787,913 - BWI76_RS08445 0.15 -2.0 1,788,016 + BWI76_RS08445 0.32 +1.0 1,788,018 + BWI76_RS08445 0.33 -0.3 1,788,026 - BWI76_RS08445 0.34 +0.4 1,788,186 + BWI76_RS08445 0.60 +0.1 1,788,221 - BWI76_RS08445 0.66 +0.1 1,788,280 - BWI76_RS08445 0.76 -0.8 1,788,432 + +1.2 1,788,585 - +0.4 1,788,646 + BWI76_RS08450 0.13 -0.1 1,788,761 - BWI76_RS08450 0.20 +0.4 1,789,050 + BWI76_RS08450 0.37 +2.3 1,789,139 + BWI76_RS08450 0.43 +0.1 1,789,254 + +3.4 1,789,254 + BWI76_RS08450 0.50 -0.1 1,789,496 - BWI76_RS08450 0.64 +0.8 1,789,680 + BWI76_RS08450 0.75 -3.0 1,790,600 + BWI76_RS08455 0.50 -0.0 1,790,609 - BWI76_RS08455 0.51 +0.0 1,790,811 + BWI76_RS08455 0.71 -0.3 1,790,930 - BWI76_RS08455 0.83 -0.1 1,790,942 + BWI76_RS08455 0.84 +0.3 1,791,044 + -0.3
Or see this region's nucleotide sequence