Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07560 and BWI76_RS07565 are separated by 308 nucleotides BWI76_RS07565 and BWI76_RS07570 are separated by 24 nucleotides BWI76_RS07570 and BWI76_RS07575 are separated by 234 nucleotides
BWI76_RS07560: BWI76_RS07560 - aminotransferase regulator domain-containing protein, at 1,600,675 to 1,602,009
_RS07560
BWI76_RS07565: BWI76_RS07565 - LysE type translocator family protein, at 1,602,318 to 1,602,959
_RS07565
BWI76_RS07570: BWI76_RS07570 - GntR family transcriptional regulator with, at 1,602,984 to 1,604,450
_RS07570
BWI76_RS07575: BWI76_RS07575 - ABC transporter substrate-binding protein, at 1,604,685 to 1,605,536
_RS07575
Position (kb)
1602
1603
1604
1605 Strain fitness (log2 ratio)
-1
0
1
2 at 1602.055 kb on + strand at 1602.233 kb on + strand at 1602.290 kb on + strand at 1602.290 kb on + strand at 1602.298 kb on - strand at 1602.298 kb on - strand at 1602.308 kb on - strand at 1602.334 kb on + strand at 1602.395 kb on + strand, within BWI76_RS07565 at 1602.419 kb on + strand, within BWI76_RS07565 at 1602.445 kb on - strand, within BWI76_RS07565 at 1602.457 kb on + strand, within BWI76_RS07565 at 1602.463 kb on + strand, within BWI76_RS07565 at 1602.773 kb on + strand, within BWI76_RS07565 at 1602.773 kb on + strand, within BWI76_RS07565 at 1602.781 kb on - strand, within BWI76_RS07565 at 1602.802 kb on - strand, within BWI76_RS07565 at 1602.821 kb on - strand, within BWI76_RS07565 at 1602.835 kb on + strand, within BWI76_RS07565 at 1603.016 kb on + strand at 1603.158 kb on - strand, within BWI76_RS07570 at 1603.162 kb on + strand, within BWI76_RS07570 at 1603.275 kb on - strand, within BWI76_RS07570 at 1603.376 kb on + strand, within BWI76_RS07570 at 1603.400 kb on - strand, within BWI76_RS07570 at 1603.631 kb on - strand, within BWI76_RS07570 at 1604.095 kb on - strand, within BWI76_RS07570 at 1604.144 kb on - strand, within BWI76_RS07570 at 1604.216 kb on + strand, within BWI76_RS07570 at 1604.224 kb on - strand, within BWI76_RS07570 at 1604.238 kb on + strand, within BWI76_RS07570 at 1604.290 kb on - strand, within BWI76_RS07570 at 1604.339 kb on - strand at 1604.439 kb on - strand at 1604.476 kb on + strand at 1604.476 kb on + strand at 1604.484 kb on - strand at 1604.517 kb on - strand at 1604.539 kb on - strand at 1604.598 kb on + strand at 1604.598 kb on + strand at 1604.708 kb on - strand at 1604.719 kb on + strand at 1604.727 kb on - strand at 1604.727 kb on - strand at 1604.789 kb on + strand, within BWI76_RS07575 at 1604.820 kb on + strand, within BWI76_RS07575 at 1604.820 kb on + strand, within BWI76_RS07575 at 1604.828 kb on - strand, within BWI76_RS07575 at 1604.828 kb on - strand, within BWI76_RS07575 at 1604.865 kb on + strand, within BWI76_RS07575 at 1604.914 kb on + strand, within BWI76_RS07575 at 1604.915 kb on - strand, within BWI76_RS07575 at 1604.920 kb on - strand, within BWI76_RS07575 at 1604.922 kb on - strand, within BWI76_RS07575 at 1604.940 kb on - strand, within BWI76_RS07575 at 1604.955 kb on + strand, within BWI76_RS07575 at 1604.964 kb on + strand, within BWI76_RS07575 at 1604.970 kb on + strand, within BWI76_RS07575 at 1604.970 kb on + strand, within BWI76_RS07575 at 1604.970 kb on + strand, within BWI76_RS07575 at 1604.970 kb on + strand, within BWI76_RS07575 at 1604.970 kb on + strand, within BWI76_RS07575 at 1604.978 kb on - strand, within BWI76_RS07575 at 1604.978 kb on - strand, within BWI76_RS07575 at 1604.978 kb on - strand, within BWI76_RS07575 at 1604.978 kb on - strand, within BWI76_RS07575 at 1604.978 kb on - strand, within BWI76_RS07575 at 1604.978 kb on - strand, within BWI76_RS07575 at 1604.978 kb on - strand, within BWI76_RS07575 at 1604.999 kb on - strand, within BWI76_RS07575 at 1605.001 kb on + strand, within BWI76_RS07575 at 1605.002 kb on + strand, within BWI76_RS07575 at 1605.009 kb on - strand, within BWI76_RS07575 at 1605.066 kb on + strand, within BWI76_RS07575 at 1605.074 kb on - strand, within BWI76_RS07575 at 1605.088 kb on + strand, within BWI76_RS07575 at 1605.088 kb on + strand, within BWI76_RS07575 at 1605.091 kb on - strand, within BWI76_RS07575 at 1605.217 kb on + strand, within BWI76_RS07575 at 1605.225 kb on - strand, within BWI76_RS07575 at 1605.227 kb on - strand, within BWI76_RS07575 at 1605.229 kb on + strand, within BWI76_RS07575 at 1605.293 kb on + strand, within BWI76_RS07575 at 1605.299 kb on + strand, within BWI76_RS07575 at 1605.312 kb on - strand, within BWI76_RS07575 at 1605.332 kb on - strand, within BWI76_RS07575 at 1605.391 kb on - strand, within BWI76_RS07575
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,602,055 + +1.5 1,602,233 + +0.9 1,602,290 + +0.2 1,602,290 + -0.0 1,602,298 - -0.3 1,602,298 - -0.8 1,602,308 - +2.2 1,602,334 + -0.1 1,602,395 + BWI76_RS07565 0.12 +1.8 1,602,419 + BWI76_RS07565 0.16 +0.1 1,602,445 - BWI76_RS07565 0.20 +1.8 1,602,457 + BWI76_RS07565 0.22 -0.1 1,602,463 + BWI76_RS07565 0.23 +1.4 1,602,773 + BWI76_RS07565 0.71 +0.1 1,602,773 + BWI76_RS07565 0.71 +0.1 1,602,781 - BWI76_RS07565 0.72 -0.7 1,602,802 - BWI76_RS07565 0.75 +0.3 1,602,821 - BWI76_RS07565 0.78 -0.5 1,602,835 + BWI76_RS07565 0.81 +0.4 1,603,016 + +1.0 1,603,158 - BWI76_RS07570 0.12 +0.3 1,603,162 + BWI76_RS07570 0.12 -0.3 1,603,275 - BWI76_RS07570 0.20 -0.2 1,603,376 + BWI76_RS07570 0.27 +0.2 1,603,400 - BWI76_RS07570 0.28 +0.2 1,603,631 - BWI76_RS07570 0.44 -0.5 1,604,095 - BWI76_RS07570 0.76 +0.3 1,604,144 - BWI76_RS07570 0.79 -0.1 1,604,216 + BWI76_RS07570 0.84 -0.1 1,604,224 - BWI76_RS07570 0.85 +0.4 1,604,238 + BWI76_RS07570 0.85 -0.8 1,604,290 - BWI76_RS07570 0.89 +1.3 1,604,339 - +0.0 1,604,439 - +0.1 1,604,476 + +1.8 1,604,476 + +0.2 1,604,484 - +0.0 1,604,517 - +0.5 1,604,539 - +0.2 1,604,598 + +0.1 1,604,598 + +0.6 1,604,708 - +0.2 1,604,719 + -0.3 1,604,727 - -0.3 1,604,727 - +0.7 1,604,789 + BWI76_RS07575 0.12 -0.5 1,604,820 + BWI76_RS07575 0.16 +0.1 1,604,820 + BWI76_RS07575 0.16 +0.0 1,604,828 - BWI76_RS07575 0.17 -0.7 1,604,828 - BWI76_RS07575 0.17 +0.2 1,604,865 + BWI76_RS07575 0.21 +0.2 1,604,914 + BWI76_RS07575 0.27 -0.4 1,604,915 - BWI76_RS07575 0.27 -0.4 1,604,920 - BWI76_RS07575 0.28 +0.4 1,604,922 - BWI76_RS07575 0.28 -0.7 1,604,940 - BWI76_RS07575 0.30 -0.7 1,604,955 + BWI76_RS07575 0.32 +1.6 1,604,964 + BWI76_RS07575 0.33 -0.7 1,604,970 + BWI76_RS07575 0.33 +0.7 1,604,970 + BWI76_RS07575 0.33 +0.5 1,604,970 + BWI76_RS07575 0.33 -0.1 1,604,970 + BWI76_RS07575 0.33 -0.3 1,604,970 + BWI76_RS07575 0.33 -0.1 1,604,978 - BWI76_RS07575 0.34 -0.4 1,604,978 - BWI76_RS07575 0.34 -0.2 1,604,978 - BWI76_RS07575 0.34 -1.0 1,604,978 - BWI76_RS07575 0.34 -0.2 1,604,978 - BWI76_RS07575 0.34 +0.2 1,604,978 - BWI76_RS07575 0.34 +0.3 1,604,978 - BWI76_RS07575 0.34 -0.5 1,604,999 - BWI76_RS07575 0.37 -0.5 1,605,001 + BWI76_RS07575 0.37 +0.2 1,605,002 + BWI76_RS07575 0.37 +0.7 1,605,009 - BWI76_RS07575 0.38 -0.6 1,605,066 + BWI76_RS07575 0.45 +0.3 1,605,074 - BWI76_RS07575 0.46 +0.4 1,605,088 + BWI76_RS07575 0.47 -0.4 1,605,088 + BWI76_RS07575 0.47 -1.2 1,605,091 - BWI76_RS07575 0.48 -0.2 1,605,217 + BWI76_RS07575 0.62 -0.1 1,605,225 - BWI76_RS07575 0.63 +1.6 1,605,227 - BWI76_RS07575 0.64 +0.5 1,605,229 + BWI76_RS07575 0.64 -0.1 1,605,293 + BWI76_RS07575 0.71 -0.4 1,605,299 + BWI76_RS07575 0.72 +0.2 1,605,312 - BWI76_RS07575 0.74 -0.8 1,605,332 - BWI76_RS07575 0.76 -0.5 1,605,391 - BWI76_RS07575 0.83 -0.1
Or see this region's nucleotide sequence