Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06660

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06650 and BWI76_RS06655 overlap by 4 nucleotidesBWI76_RS06655 and BWI76_RS06660 are separated by 133 nucleotidesBWI76_RS06660 and BWI76_RS06665 are separated by 87 nucleotidesBWI76_RS06665 and BWI76_RS06670 are separated by 92 nucleotides BWI76_RS06650: BWI76_RS06650 - hypothetical protein, at 1,396,025 to 1,396,282 _RS06650 BWI76_RS06655: BWI76_RS06655 - hypothetical protein, at 1,396,279 to 1,396,494 _RS06655 BWI76_RS06660: BWI76_RS06660 - GntR family transcriptional regulator with, at 1,396,628 to 1,398,055 _RS06660 BWI76_RS06665: BWI76_RS06665 - membrane protein, at 1,398,143 to 1,398,757 _RS06665 BWI76_RS06670: BWI76_RS06670 - hypothetical protein, at 1,398,850 to 1,399,203 _RS06670 Position (kb) 1396 1397 1398 1399Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1395.718 kb on + strandat 1395.732 kb on + strandat 1395.758 kb on + strandat 1395.766 kb on - strandat 1395.766 kb on - strandat 1395.904 kb on - strandat 1395.938 kb on + strandat 1396.022 kb on + strandat 1396.022 kb on + strandat 1396.022 kb on + strandat 1396.022 kb on + strandat 1396.022 kb on + strandat 1396.023 kb on + strandat 1396.027 kb on + strandat 1396.030 kb on - strandat 1396.030 kb on - strandat 1396.030 kb on - strandat 1396.032 kb on + strandat 1396.032 kb on + strandat 1396.035 kb on - strandat 1396.037 kb on + strandat 1396.037 kb on + strandat 1396.040 kb on - strandat 1396.124 kb on + strand, within BWI76_RS06650at 1396.124 kb on - strand, within BWI76_RS06650at 1396.130 kb on + strand, within BWI76_RS06650at 1396.135 kb on + strand, within BWI76_RS06650at 1396.135 kb on + strand, within BWI76_RS06650at 1396.135 kb on + strand, within BWI76_RS06650at 1396.135 kb on + strand, within BWI76_RS06650at 1396.135 kb on + strand, within BWI76_RS06650at 1396.135 kb on + strand, within BWI76_RS06650at 1396.135 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strandat 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strandat 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.136 kb on + strand, within BWI76_RS06650at 1396.144 kb on - strand, within BWI76_RS06650at 1396.144 kb on - strand, within BWI76_RS06650at 1396.144 kb on - strand, within BWI76_RS06650at 1396.170 kb on + strand, within BWI76_RS06650at 1396.170 kb on + strand, within BWI76_RS06650at 1396.178 kb on - strand, within BWI76_RS06650at 1396.178 kb on - strand, within BWI76_RS06650at 1396.179 kb on - strand, within BWI76_RS06650at 1396.194 kb on + strand, within BWI76_RS06650at 1396.204 kb on + strand, within BWI76_RS06650at 1396.204 kb on + strand, within BWI76_RS06650at 1396.293 kb on + strandat 1396.293 kb on + strandat 1396.301 kb on - strand, within BWI76_RS06655at 1396.301 kb on - strand, within BWI76_RS06655at 1396.301 kb on - strand, within BWI76_RS06655at 1396.308 kb on + strand, within BWI76_RS06655at 1396.316 kb on - strand, within BWI76_RS06655at 1396.316 kb on - strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.318 kb on + strand, within BWI76_RS06655at 1396.326 kb on - strand, within BWI76_RS06655at 1396.326 kb on - strandat 1396.326 kb on - strand, within BWI76_RS06655at 1396.326 kb on - strand, within BWI76_RS06655at 1396.326 kb on - strand, within BWI76_RS06655at 1396.326 kb on - strand, within BWI76_RS06655at 1396.326 kb on - strandat 1396.326 kb on - strandat 1396.326 kb on - strand, within BWI76_RS06655at 1396.327 kb on + strand, within BWI76_RS06655at 1396.329 kb on + strand, within BWI76_RS06655at 1396.329 kb on + strand, within BWI76_RS06655at 1396.332 kb on + strand, within BWI76_RS06655at 1396.335 kb on - strand, within BWI76_RS06655at 1396.337 kb on - strand, within BWI76_RS06655at 1396.337 kb on - strandat 1396.350 kb on + strand, within BWI76_RS06655at 1396.352 kb on + strand, within BWI76_RS06655at 1396.352 kb on - strand, within BWI76_RS06655at 1396.353 kb on + strand, within BWI76_RS06655at 1396.357 kb on + strand, within BWI76_RS06655at 1396.360 kb on - strand, within BWI76_RS06655at 1396.365 kb on - strand, within BWI76_RS06655at 1396.365 kb on - strand, within BWI76_RS06655at 1396.399 kb on + strand, within BWI76_RS06655at 1396.399 kb on + strand, within BWI76_RS06655at 1396.407 kb on - strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.410 kb on + strand, within BWI76_RS06655at 1396.417 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.418 kb on - strand, within BWI76_RS06655at 1396.476 kb on - strandat 1396.496 kb on - strandat 1396.566 kb on + strandat 1396.568 kb on + strandat 1396.601 kb on + strandat 1396.602 kb on + strandat 1396.605 kb on + strandat 1396.605 kb on + strandat 1396.606 kb on + strandat 1396.606 kb on + strandat 1396.606 kb on + strandat 1396.613 kb on - strandat 1396.614 kb on - strandat 1396.614 kb on - strandat 1396.614 kb on - strandat 1396.631 kb on + strandat 1396.653 kb on + strandat 1396.653 kb on + strandat 1396.653 kb on + strandat 1396.658 kb on + strandat 1396.661 kb on - strandat 1396.661 kb on - strandat 1396.661 kb on - strandat 1396.661 kb on - strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on + strandat 1396.666 kb on - strandat 1396.671 kb on + strandat 1396.672 kb on + strandat 1396.672 kb on + strandat 1396.672 kb on + strandat 1396.672 kb on + strandat 1396.672 kb on + strandat 1396.672 kb on + strandat 1396.672 kb on + strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.674 kb on - strandat 1396.679 kb on - strandat 1396.679 kb on - strandat 1396.685 kb on + strandat 1396.690 kb on + strandat 1396.709 kb on + strandat 1396.717 kb on - strandat 1396.717 kb on - strandat 1396.717 kb on - strandat 1396.717 kb on - strandat 1396.717 kb on - strandat 1396.720 kb on + strandat 1396.728 kb on - strandat 1396.730 kb on + strandat 1396.737 kb on - strandat 1396.738 kb on - strandat 1396.766 kb on + strandat 1396.771 kb on + strand, within BWI76_RS06660at 1396.778 kb on + strand, within BWI76_RS06660at 1396.778 kb on + strand, within BWI76_RS06660at 1396.779 kb on - strand, within BWI76_RS06660at 1396.779 kb on - strand, within BWI76_RS06660at 1396.875 kb on + strand, within BWI76_RS06660at 1396.964 kb on - strand, within BWI76_RS06660at 1397.031 kb on - strand, within BWI76_RS06660at 1397.098 kb on - strand, within BWI76_RS06660at 1397.110 kb on - strand, within BWI76_RS06660at 1397.398 kb on + strand, within BWI76_RS06660at 1397.434 kb on - strand, within BWI76_RS06660at 1397.626 kb on - strand, within BWI76_RS06660at 1397.718 kb on - strand, within BWI76_RS06660at 1397.818 kb on - strand, within BWI76_RS06660at 1397.937 kb on + strandat 1398.136 kb on - strandat 1398.187 kb on - strandat 1398.298 kb on + strand, within BWI76_RS06665at 1398.472 kb on + strand, within BWI76_RS06665at 1398.775 kb on - strandat 1398.898 kb on + strand, within BWI76_RS06670at 1398.964 kb on + strand, within BWI76_RS06670at 1398.972 kb on - strand, within BWI76_RS06670at 1399.025 kb on + strand, within BWI76_RS06670at 1399.045 kb on + strand, within BWI76_RS06670

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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1,395,718 + +0.4
1,395,732 + -0.1
1,395,758 + +0.3
1,395,766 - +0.3
1,395,766 - -0.4
1,395,904 - -0.3
1,395,938 + +0.1
1,396,022 + -0.3
1,396,022 + -2.7
1,396,022 + -1.0
1,396,022 + -1.1
1,396,022 + -0.4
1,396,023 + -0.7
1,396,027 + +0.3
1,396,030 - +0.0
1,396,030 - -0.7
1,396,030 - +0.1
1,396,032 + -1.3
1,396,032 + -2.1
1,396,035 - -1.6
1,396,037 + -0.1
1,396,037 + -1.2
1,396,040 - +0.3
1,396,124 + BWI76_RS06650 0.38 +0.6
1,396,124 - BWI76_RS06650 0.38 -1.3
1,396,130 + BWI76_RS06650 0.41 -0.2
1,396,135 + BWI76_RS06650 0.43 -1.0
1,396,135 + BWI76_RS06650 0.43 +1.0
1,396,135 + BWI76_RS06650 0.43 -1.8
1,396,135 + BWI76_RS06650 0.43 -0.0
1,396,135 + BWI76_RS06650 0.43 +0.7
1,396,135 + BWI76_RS06650 0.43 -0.1
1,396,135 + BWI76_RS06650 0.43 -1.0
1,396,136 + BWI76_RS06650 0.43 -0.5
1,396,136 + BWI76_RS06650 0.43 +0.1
1,396,136 + BWI76_RS06650 0.43 -0.4
1,396,136 + BWI76_RS06650 0.43 -0.5
1,396,136 + BWI76_RS06650 0.43 +0.1
1,396,136 + BWI76_RS06650 0.43 -1.4
1,396,136 + BWI76_RS06650 0.43 -0.6
1,396,136 + BWI76_RS06650 0.43 -0.2
1,396,136 + +0.3
1,396,136 + BWI76_RS06650 0.43 -2.0
1,396,136 + BWI76_RS06650 0.43 +0.4
1,396,136 + BWI76_RS06650 0.43 -1.0
1,396,136 + BWI76_RS06650 0.43 -0.2
1,396,136 + +2.4
1,396,136 + BWI76_RS06650 0.43 -0.0
1,396,136 + BWI76_RS06650 0.43 +0.4
1,396,136 + BWI76_RS06650 0.43 +0.7
1,396,136 + BWI76_RS06650 0.43 +0.2
1,396,136 + BWI76_RS06650 0.43 +0.8
1,396,144 - BWI76_RS06650 0.46 -0.7
1,396,144 - BWI76_RS06650 0.46 -0.0
1,396,144 - BWI76_RS06650 0.46 -0.2
1,396,170 + BWI76_RS06650 0.56 +1.3
1,396,170 + BWI76_RS06650 0.56 -0.2
1,396,178 - BWI76_RS06650 0.59 +0.6
1,396,178 - BWI76_RS06650 0.59 +0.3
1,396,179 - BWI76_RS06650 0.60 -0.2
1,396,194 + BWI76_RS06650 0.66 -0.7
1,396,204 + BWI76_RS06650 0.69 -0.1
1,396,204 + BWI76_RS06650 0.69 -0.3
1,396,293 + -0.6
1,396,293 + -0.8
1,396,301 - BWI76_RS06655 0.10 -1.7
1,396,301 - BWI76_RS06655 0.10 -0.5
1,396,301 - BWI76_RS06655 0.10 +0.8
1,396,308 + BWI76_RS06655 0.13 +0.6
1,396,316 - BWI76_RS06655 0.17 -1.5
1,396,316 - BWI76_RS06655 0.17 -1.2
1,396,318 + BWI76_RS06655 0.18 +0.1
1,396,318 + BWI76_RS06655 0.18 +0.3
1,396,318 + BWI76_RS06655 0.18 +0.0
1,396,318 + BWI76_RS06655 0.18 -0.3
1,396,318 + BWI76_RS06655 0.18 -0.2
1,396,318 + BWI76_RS06655 0.18 -0.9
1,396,318 + BWI76_RS06655 0.18 +1.2
1,396,318 + BWI76_RS06655 0.18 -0.1
1,396,318 + BWI76_RS06655 0.18 +1.1
1,396,318 + BWI76_RS06655 0.18 -0.2
1,396,318 + BWI76_RS06655 0.18 +0.0
1,396,326 - BWI76_RS06655 0.22 -0.7
1,396,326 - -0.2
1,396,326 - BWI76_RS06655 0.22 +0.3
1,396,326 - BWI76_RS06655 0.22 -0.1
1,396,326 - BWI76_RS06655 0.22 +0.9
1,396,326 - BWI76_RS06655 0.22 +0.3
1,396,326 - -1.0
1,396,326 - +0.8
1,396,326 - BWI76_RS06655 0.22 +0.8
1,396,327 + BWI76_RS06655 0.22 +1.8
1,396,329 + BWI76_RS06655 0.23 -1.8
1,396,329 + BWI76_RS06655 0.23 +0.6
1,396,332 + BWI76_RS06655 0.25 -0.7
1,396,335 - BWI76_RS06655 0.26 +0.3
1,396,337 - BWI76_RS06655 0.27 +1.5
1,396,337 - +1.8
1,396,350 + BWI76_RS06655 0.33 -0.2
1,396,352 + BWI76_RS06655 0.34 +1.1
1,396,352 - BWI76_RS06655 0.34 +0.3
1,396,353 + BWI76_RS06655 0.34 -0.3
1,396,357 + BWI76_RS06655 0.36 -1.3
1,396,360 - BWI76_RS06655 0.38 -1.2
1,396,365 - BWI76_RS06655 0.40 -2.1
1,396,365 - BWI76_RS06655 0.40 +0.2
1,396,399 + BWI76_RS06655 0.56 -0.1
1,396,399 + BWI76_RS06655 0.56 +0.4
1,396,407 - BWI76_RS06655 0.59 +0.3
1,396,410 + BWI76_RS06655 0.61 +0.2
1,396,410 + BWI76_RS06655 0.61 -1.2
1,396,410 + BWI76_RS06655 0.61 +0.6
1,396,410 + BWI76_RS06655 0.61 -0.2
1,396,410 + BWI76_RS06655 0.61 +1.1
1,396,410 + BWI76_RS06655 0.61 +0.3
1,396,410 + BWI76_RS06655 0.61 +0.6
1,396,410 + BWI76_RS06655 0.61 +0.3
1,396,410 + BWI76_RS06655 0.61 +0.5
1,396,410 + BWI76_RS06655 0.61 +0.1
1,396,410 + BWI76_RS06655 0.61 -0.1
1,396,417 - BWI76_RS06655 0.64 +0.9
1,396,418 - BWI76_RS06655 0.64 -0.1
1,396,418 - BWI76_RS06655 0.64 -0.7
1,396,418 - BWI76_RS06655 0.64 -2.1
1,396,418 - BWI76_RS06655 0.64 +0.6
1,396,418 - BWI76_RS06655 0.64 -0.2
1,396,418 - BWI76_RS06655 0.64 +1.1
1,396,418 - BWI76_RS06655 0.64 +0.5
1,396,418 - BWI76_RS06655 0.64 -1.7
1,396,418 - BWI76_RS06655 0.64 -0.2
1,396,418 - BWI76_RS06655 0.64 +0.3
1,396,476 - -1.2
1,396,496 - +0.7
1,396,566 + +0.3
1,396,568 + +0.5
1,396,601 + -0.4
1,396,602 + +0.6
1,396,605 + +0.2
1,396,605 + -2.1
1,396,606 + +0.4
1,396,606 + -0.2
1,396,606 + +0.8
1,396,613 - +0.1
1,396,614 - -0.5
1,396,614 - -0.7
1,396,614 - +0.8
1,396,631 + +1.8
1,396,653 + +0.0
1,396,653 + +0.0
1,396,653 + +0.5
1,396,658 + +1.6
1,396,661 - -0.0
1,396,661 - -0.7
1,396,661 - -1.5
1,396,661 - +0.3
1,396,666 + -0.1
1,396,666 + -0.1
1,396,666 + -0.3
1,396,666 + +0.6
1,396,666 + +0.3
1,396,666 + +0.3
1,396,666 + +0.1
1,396,666 + +0.6
1,396,666 + +0.3
1,396,666 + +0.1
1,396,666 + -0.6
1,396,666 + +0.6
1,396,666 - -0.4
1,396,671 + +3.0
1,396,672 + -0.5
1,396,672 + +0.6
1,396,672 + +0.3
1,396,672 + +1.2
1,396,672 + +0.6
1,396,672 + +0.4
1,396,672 + +0.2
1,396,674 - +0.1
1,396,674 - -0.4
1,396,674 - -0.6
1,396,674 - +1.5
1,396,674 - +0.0
1,396,674 - +0.7
1,396,674 - +0.5
1,396,674 - +0.3
1,396,674 - +0.5
1,396,674 - -1.6
1,396,674 - +0.1
1,396,674 - +0.6
1,396,674 - -0.1
1,396,674 - +0.2
1,396,674 - +0.3
1,396,674 - -1.4
1,396,674 - +0.1
1,396,679 - +0.1
1,396,679 - -1.2
1,396,685 + +0.4
1,396,690 + +0.0
1,396,709 + +1.2
1,396,717 - -2.1
1,396,717 - +0.5
1,396,717 - -1.2
1,396,717 - -0.2
1,396,717 - +0.8
1,396,720 + +0.3
1,396,728 - -0.3
1,396,730 + -0.5
1,396,737 - +0.1
1,396,738 - -0.3
1,396,766 + +0.2
1,396,771 + BWI76_RS06660 0.10 -0.1
1,396,778 + BWI76_RS06660 0.11 -0.5
1,396,778 + BWI76_RS06660 0.11 +0.0
1,396,779 - BWI76_RS06660 0.11 -1.1
1,396,779 - BWI76_RS06660 0.11 +0.6
1,396,875 + BWI76_RS06660 0.17 +0.1
1,396,964 - BWI76_RS06660 0.24 +0.3
1,397,031 - BWI76_RS06660 0.28 -0.0
1,397,098 - BWI76_RS06660 0.33 +0.3
1,397,110 - BWI76_RS06660 0.34 -0.6
1,397,398 + BWI76_RS06660 0.54 +0.1
1,397,434 - BWI76_RS06660 0.56 -0.0
1,397,626 - BWI76_RS06660 0.70 +0.3
1,397,718 - BWI76_RS06660 0.76 -0.4
1,397,818 - BWI76_RS06660 0.83 +0.7
1,397,937 + -0.5
1,398,136 - -0.2
1,398,187 - +0.3
1,398,298 + BWI76_RS06665 0.25 -0.1
1,398,472 + BWI76_RS06665 0.53 -1.6
1,398,775 - -0.4
1,398,898 + BWI76_RS06670 0.14 +0.1
1,398,964 + BWI76_RS06670 0.32 -0.3
1,398,972 - BWI76_RS06670 0.34 -0.3
1,399,025 + BWI76_RS06670 0.49 +0.3
1,399,045 + BWI76_RS06670 0.55 +0.4

Or see this region's nucleotide sequence