Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03685 and BWI76_RS03690 are separated by 231 nucleotides BWI76_RS03690 and BWI76_RS03695 are separated by 177 nucleotides BWI76_RS03695 and BWI76_RS03700 are separated by 339 nucleotides
BWI76_RS03685: BWI76_RS03685 - restriction endonuclease, at 764,920 to 766,086
_RS03685
BWI76_RS03690: BWI76_RS03690 - transcriptional regulator, GntR family/aminotransferase family protein, at 766,318 to 767,730
_RS03690
BWI76_RS03695: BWI76_RS03695 - DUF1127 domain-containing protein, at 767,908 to 768,072
_RS03695
BWI76_RS03700: BWI76_RS03700 - hypothetical protein, at 768,412 to 768,876
_RS03700
Position (kb)
766
767
768 Strain fitness (log2 ratio)
-2
-1
0
1 at 765.533 kb on + strand, within BWI76_RS03685 at 765.627 kb on + strand, within BWI76_RS03685 at 765.635 kb on - strand, within BWI76_RS03685 at 765.684 kb on + strand, within BWI76_RS03685 at 765.703 kb on + strand, within BWI76_RS03685 at 765.738 kb on - strand, within BWI76_RS03685 at 765.829 kb on - strand, within BWI76_RS03685 at 765.842 kb on + strand, within BWI76_RS03685 at 765.842 kb on + strand, within BWI76_RS03685 at 765.943 kb on + strand, within BWI76_RS03685 at 765.946 kb on - strand, within BWI76_RS03685 at 765.971 kb on - strand at 766.019 kb on + strand at 766.019 kb on + strand at 766.118 kb on - strand at 766.118 kb on - strand at 766.164 kb on - strand at 766.197 kb on - strand at 766.280 kb on - strand at 766.308 kb on + strand at 766.308 kb on + strand at 766.316 kb on + strand at 766.316 kb on - strand at 766.323 kb on - strand at 766.363 kb on - strand at 766.492 kb on + strand, within BWI76_RS03690 at 766.535 kb on - strand, within BWI76_RS03690 at 766.599 kb on - strand, within BWI76_RS03690 at 766.600 kb on - strand, within BWI76_RS03690 at 766.656 kb on - strand, within BWI76_RS03690 at 766.656 kb on - strand, within BWI76_RS03690 at 766.805 kb on + strand, within BWI76_RS03690 at 767.326 kb on - strand, within BWI76_RS03690 at 767.344 kb on + strand, within BWI76_RS03690 at 767.357 kb on - strand, within BWI76_RS03690 at 767.372 kb on - strand, within BWI76_RS03690 at 767.372 kb on - strand, within BWI76_RS03690 at 767.372 kb on - strand, within BWI76_RS03690 at 767.598 kb on + strand at 767.666 kb on + strand at 767.720 kb on - strand at 767.900 kb on - strand at 768.197 kb on - strand at 768.262 kb on - strand at 768.266 kb on + strand at 768.297 kb on - strand at 768.297 kb on - strand at 768.297 kb on - strand at 768.610 kb on - strand, within BWI76_RS03700 at 768.637 kb on - strand, within BWI76_RS03700 at 768.673 kb on - strand, within BWI76_RS03700
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 765,533 + BWI76_RS03685 0.53 -0.4 765,627 + BWI76_RS03685 0.61 -0.4 765,635 - BWI76_RS03685 0.61 +0.3 765,684 + BWI76_RS03685 0.65 -0.0 765,703 + BWI76_RS03685 0.67 +0.2 765,738 - BWI76_RS03685 0.70 +0.1 765,829 - BWI76_RS03685 0.78 -0.2 765,842 + BWI76_RS03685 0.79 -0.3 765,842 + BWI76_RS03685 0.79 -0.0 765,943 + BWI76_RS03685 0.88 -0.2 765,946 - BWI76_RS03685 0.88 -0.2 765,971 - +0.3 766,019 + +0.8 766,019 + +0.2 766,118 - +0.2 766,118 - +1.1 766,164 - -0.4 766,197 - +0.3 766,280 - +0.0 766,308 + -1.0 766,308 + +0.2 766,316 + -0.3 766,316 - -0.1 766,323 - -0.6 766,363 - -0.0 766,492 + BWI76_RS03690 0.12 -0.8 766,535 - BWI76_RS03690 0.15 +0.9 766,599 - BWI76_RS03690 0.20 -0.3 766,600 - BWI76_RS03690 0.20 -0.4 766,656 - BWI76_RS03690 0.24 -0.0 766,656 - BWI76_RS03690 0.24 -0.4 766,805 + BWI76_RS03690 0.34 +1.1 767,326 - BWI76_RS03690 0.71 +0.5 767,344 + BWI76_RS03690 0.73 -0.3 767,357 - BWI76_RS03690 0.74 +0.3 767,372 - BWI76_RS03690 0.75 -0.3 767,372 - BWI76_RS03690 0.75 -0.2 767,372 - BWI76_RS03690 0.75 -0.4 767,598 + -0.2 767,666 + +0.2 767,720 - -0.5 767,900 - +0.1 768,197 - -2.1 768,262 - -0.2 768,266 + +1.0 768,297 - -0.2 768,297 - -0.5 768,297 - +0.5 768,610 - BWI76_RS03700 0.43 +0.0 768,637 - BWI76_RS03700 0.48 -0.4 768,673 - BWI76_RS03700 0.56 -0.7
Or see this region's nucleotide sequence