Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03690

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS03685 and BWI76_RS03690 are separated by 231 nucleotidesBWI76_RS03690 and BWI76_RS03695 are separated by 177 nucleotidesBWI76_RS03695 and BWI76_RS03700 are separated by 339 nucleotides BWI76_RS03685: BWI76_RS03685 - restriction endonuclease, at 764,920 to 766,086 _RS03685 BWI76_RS03690: BWI76_RS03690 - transcriptional regulator, GntR family/aminotransferase family protein, at 766,318 to 767,730 _RS03690 BWI76_RS03695: BWI76_RS03695 - DUF1127 domain-containing protein, at 767,908 to 768,072 _RS03695 BWI76_RS03700: BWI76_RS03700 - hypothetical protein, at 768,412 to 768,876 _RS03700 Position (kb) 766 767 768Strain fitness (log2 ratio) -2 -1 0 1at 765.533 kb on + strand, within BWI76_RS03685at 765.627 kb on + strand, within BWI76_RS03685at 765.635 kb on - strand, within BWI76_RS03685at 765.684 kb on + strand, within BWI76_RS03685at 765.703 kb on + strand, within BWI76_RS03685at 765.738 kb on - strand, within BWI76_RS03685at 765.829 kb on - strand, within BWI76_RS03685at 765.842 kb on + strand, within BWI76_RS03685at 765.842 kb on + strand, within BWI76_RS03685at 765.943 kb on + strand, within BWI76_RS03685at 765.946 kb on - strand, within BWI76_RS03685at 765.971 kb on - strandat 766.019 kb on + strandat 766.019 kb on + strandat 766.118 kb on - strandat 766.118 kb on - strandat 766.164 kb on - strandat 766.197 kb on - strandat 766.280 kb on - strandat 766.308 kb on + strandat 766.308 kb on + strandat 766.316 kb on + strandat 766.316 kb on - strandat 766.323 kb on - strandat 766.363 kb on - strandat 766.492 kb on + strand, within BWI76_RS03690at 766.535 kb on - strand, within BWI76_RS03690at 766.599 kb on - strand, within BWI76_RS03690at 766.600 kb on - strand, within BWI76_RS03690at 766.656 kb on - strand, within BWI76_RS03690at 766.656 kb on - strand, within BWI76_RS03690at 766.805 kb on + strand, within BWI76_RS03690at 767.326 kb on - strand, within BWI76_RS03690at 767.344 kb on + strand, within BWI76_RS03690at 767.357 kb on - strand, within BWI76_RS03690at 767.372 kb on - strand, within BWI76_RS03690at 767.372 kb on - strand, within BWI76_RS03690at 767.372 kb on - strand, within BWI76_RS03690at 767.598 kb on + strandat 767.666 kb on + strandat 767.720 kb on - strandat 767.900 kb on - strandat 768.197 kb on - strandat 768.262 kb on - strandat 768.266 kb on + strandat 768.297 kb on - strandat 768.297 kb on - strandat 768.297 kb on - strandat 768.610 kb on - strand, within BWI76_RS03700at 768.637 kb on - strand, within BWI76_RS03700at 768.673 kb on - strand, within BWI76_RS03700

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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765,533 + BWI76_RS03685 0.53 -0.4
765,627 + BWI76_RS03685 0.61 -0.4
765,635 - BWI76_RS03685 0.61 +0.3
765,684 + BWI76_RS03685 0.65 -0.0
765,703 + BWI76_RS03685 0.67 +0.2
765,738 - BWI76_RS03685 0.70 +0.1
765,829 - BWI76_RS03685 0.78 -0.2
765,842 + BWI76_RS03685 0.79 -0.3
765,842 + BWI76_RS03685 0.79 -0.0
765,943 + BWI76_RS03685 0.88 -0.2
765,946 - BWI76_RS03685 0.88 -0.2
765,971 - +0.3
766,019 + +0.8
766,019 + +0.2
766,118 - +0.2
766,118 - +1.1
766,164 - -0.4
766,197 - +0.3
766,280 - +0.0
766,308 + -1.0
766,308 + +0.2
766,316 + -0.3
766,316 - -0.1
766,323 - -0.6
766,363 - -0.0
766,492 + BWI76_RS03690 0.12 -0.8
766,535 - BWI76_RS03690 0.15 +0.9
766,599 - BWI76_RS03690 0.20 -0.3
766,600 - BWI76_RS03690 0.20 -0.4
766,656 - BWI76_RS03690 0.24 -0.0
766,656 - BWI76_RS03690 0.24 -0.4
766,805 + BWI76_RS03690 0.34 +1.1
767,326 - BWI76_RS03690 0.71 +0.5
767,344 + BWI76_RS03690 0.73 -0.3
767,357 - BWI76_RS03690 0.74 +0.3
767,372 - BWI76_RS03690 0.75 -0.3
767,372 - BWI76_RS03690 0.75 -0.2
767,372 - BWI76_RS03690 0.75 -0.4
767,598 + -0.2
767,666 + +0.2
767,720 - -0.5
767,900 - +0.1
768,197 - -2.1
768,262 - -0.2
768,266 + +1.0
768,297 - -0.2
768,297 - -0.5
768,297 - +0.5
768,610 - BWI76_RS03700 0.43 +0.0
768,637 - BWI76_RS03700 0.48 -0.4
768,673 - BWI76_RS03700 0.56 -0.7

Or see this region's nucleotide sequence