Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31425 and AZOBR_RS31430 are separated by 151 nucleotides AZOBR_RS31430 and AZOBR_RS31435 are separated by 176 nucleotides
AZOBR_RS31425: AZOBR_RS31425 - glucuronate isomerase, at 417,313 to 418,716
_RS31425
AZOBR_RS31430: AZOBR_RS31430 - galactarate dehydratase, at 418,868 to 420,391
_RS31430
AZOBR_RS31435: AZOBR_RS31435 - LysR family transcriptional regulator, at 420,568 to 421,434
_RS31435
Position (kb) 418
419
420
421 Strain fitness (log2 ratio) -2
-1
0
1
2 at 418.015 kb on + strand, within AZOBR_RS31425 at 418.309 kb on + strand, within AZOBR_RS31425 at 418.310 kb on - strand, within AZOBR_RS31425 at 418.705 kb on + strand at 418.706 kb on - strand at 418.706 kb on - strand at 418.706 kb on - strand at 418.820 kb on - strand at 419.039 kb on + strand, within AZOBR_RS31430 at 419.039 kb on + strand, within AZOBR_RS31430 at 419.040 kb on - strand, within AZOBR_RS31430 at 419.040 kb on - strand, within AZOBR_RS31430 at 419.040 kb on - strand, within AZOBR_RS31430 at 419.135 kb on + strand, within AZOBR_RS31430 at 419.240 kb on + strand, within AZOBR_RS31430 at 419.240 kb on + strand, within AZOBR_RS31430 at 419.241 kb on - strand, within AZOBR_RS31430 at 419.241 kb on - strand, within AZOBR_RS31430 at 419.366 kb on + strand, within AZOBR_RS31430 at 419.367 kb on - strand, within AZOBR_RS31430 at 419.367 kb on - strand, within AZOBR_RS31430 at 419.699 kb on + strand, within AZOBR_RS31430 at 419.700 kb on - strand, within AZOBR_RS31430 at 419.796 kb on - strand, within AZOBR_RS31430 at 419.882 kb on + strand, within AZOBR_RS31430 at 419.882 kb on + strand, within AZOBR_RS31430 at 419.883 kb on - strand, within AZOBR_RS31430 at 419.883 kb on - strand, within AZOBR_RS31430 at 419.883 kb on - strand, within AZOBR_RS31430 at 420.020 kb on + strand, within AZOBR_RS31430 at 420.021 kb on - strand, within AZOBR_RS31430 at 420.205 kb on + strand, within AZOBR_RS31430 at 420.220 kb on + strand, within AZOBR_RS31430 at 420.722 kb on + strand, within AZOBR_RS31435 at 420.722 kb on + strand, within AZOBR_RS31435 at 420.722 kb on + strand, within AZOBR_RS31435 at 420.723 kb on - strand, within AZOBR_RS31435 at 420.723 kb on - strand, within AZOBR_RS31435 at 420.783 kb on - strand, within AZOBR_RS31435 at 420.783 kb on - strand, within AZOBR_RS31435 at 420.977 kb on + strand, within AZOBR_RS31435 at 420.978 kb on - strand, within AZOBR_RS31435 at 420.978 kb on - strand, within AZOBR_RS31435
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 418,015 + AZOBR_RS31425 0.50 -2.4 418,309 + AZOBR_RS31425 0.71 +0.6 418,310 - AZOBR_RS31425 0.71 -0.7 418,705 + -0.8 418,706 - +1.0 418,706 - +2.2 418,706 - -0.5 418,820 - -1.8 419,039 + AZOBR_RS31430 0.11 +0.5 419,039 + AZOBR_RS31430 0.11 -0.1 419,040 - AZOBR_RS31430 0.11 +0.7 419,040 - AZOBR_RS31430 0.11 +0.5 419,040 - AZOBR_RS31430 0.11 +0.9 419,135 + AZOBR_RS31430 0.18 +0.5 419,240 + AZOBR_RS31430 0.24 +0.6 419,240 + AZOBR_RS31430 0.24 -0.1 419,241 - AZOBR_RS31430 0.24 +0.1 419,241 - AZOBR_RS31430 0.24 +0.5 419,366 + AZOBR_RS31430 0.33 +0.2 419,367 - AZOBR_RS31430 0.33 +0.5 419,367 - AZOBR_RS31430 0.33 -0.4 419,699 + AZOBR_RS31430 0.55 +0.7 419,700 - AZOBR_RS31430 0.55 +0.4 419,796 - AZOBR_RS31430 0.61 +1.3 419,882 + AZOBR_RS31430 0.67 +1.2 419,882 + AZOBR_RS31430 0.67 -0.1 419,883 - AZOBR_RS31430 0.67 +1.2 419,883 - AZOBR_RS31430 0.67 +0.0 419,883 - AZOBR_RS31430 0.67 -2.3 420,020 + AZOBR_RS31430 0.76 +0.1 420,021 - AZOBR_RS31430 0.76 +0.7 420,205 + AZOBR_RS31430 0.88 +1.6 420,220 + AZOBR_RS31430 0.89 +0.8 420,722 + AZOBR_RS31435 0.18 +2.0 420,722 + AZOBR_RS31435 0.18 +1.6 420,722 + AZOBR_RS31435 0.18 +1.2 420,723 - AZOBR_RS31435 0.18 +0.5 420,723 - AZOBR_RS31435 0.18 -1.5 420,783 - AZOBR_RS31435 0.25 +0.8 420,783 - AZOBR_RS31435 0.25 +0.2 420,977 + AZOBR_RS31435 0.47 -0.8 420,978 - AZOBR_RS31435 0.47 -1.4 420,978 - AZOBR_RS31435 0.47 +1.2
Or see this region's nucleotide sequence