Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31370 and AZOBR_RS31375 are separated by 71 nucleotides AZOBR_RS31375 and AZOBR_RS31380 are separated by 21 nucleotides
AZOBR_RS31370: AZOBR_RS31370 - mannonate dehydratase, at 405,065 to 406,261
_RS31370
AZOBR_RS31375: AZOBR_RS31375 - dioxygenase, at 406,333 to 407,814
_RS31375
AZOBR_RS31380: AZOBR_RS31380 - transcriptional regulator, at 407,836 to 408,531
_RS31380
Position (kb) 406
407
408 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 405.655 kb on - strand, within AZOBR_RS31370 at 405.655 kb on - strand, within AZOBR_RS31370 at 405.948 kb on + strand, within AZOBR_RS31370 at 405.948 kb on + strand, within AZOBR_RS31370 at 405.949 kb on - strand, within AZOBR_RS31370 at 405.949 kb on - strand, within AZOBR_RS31370 at 405.949 kb on - strand, within AZOBR_RS31370 at 405.999 kb on + strand, within AZOBR_RS31370 at 406.000 kb on - strand, within AZOBR_RS31370 at 406.589 kb on + strand, within AZOBR_RS31375 at 406.589 kb on + strand, within AZOBR_RS31375 at 406.766 kb on + strand, within AZOBR_RS31375 at 406.766 kb on + strand, within AZOBR_RS31375 at 406.767 kb on - strand, within AZOBR_RS31375 at 406.767 kb on - strand, within AZOBR_RS31375 at 406.905 kb on - strand, within AZOBR_RS31375 at 406.955 kb on + strand, within AZOBR_RS31375 at 406.956 kb on - strand, within AZOBR_RS31375 at 407.420 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.576 kb on + strand, within AZOBR_RS31375 at 407.576 kb on + strand, within AZOBR_RS31375 at 407.576 kb on + strand, within AZOBR_RS31375 at 407.577 kb on - strand, within AZOBR_RS31375 at 407.681 kb on + strand at 407.681 kb on + strand at 407.682 kb on - strand at 407.756 kb on + strand at 407.756 kb on + strand at 407.756 kb on + strand at 407.828 kb on + strand at 407.829 kb on - strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.838 kb on - strand at 407.838 kb on - strand at 407.838 kb on - strand at 407.838 kb on - strand at 408.467 kb on + strand at 408.468 kb on - strand at 408.555 kb on + strand at 408.558 kb on + strand at 408.558 kb on + strand at 408.559 kb on - strand at 408.725 kb on + strand at 408.728 kb on + strand at 408.729 kb on - strand at 408.791 kb on - strand at 408.814 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 405,655 - AZOBR_RS31370 0.49 +0.3 405,655 - AZOBR_RS31370 0.49 +0.2 405,948 + AZOBR_RS31370 0.74 -1.2 405,948 + AZOBR_RS31370 0.74 +1.1 405,949 - AZOBR_RS31370 0.74 +0.0 405,949 - AZOBR_RS31370 0.74 +0.5 405,949 - AZOBR_RS31370 0.74 -1.5 405,999 + AZOBR_RS31370 0.78 +1.1 406,000 - AZOBR_RS31370 0.78 +1.4 406,589 + AZOBR_RS31375 0.17 -0.4 406,589 + AZOBR_RS31375 0.17 +0.8 406,766 + AZOBR_RS31375 0.29 +0.6 406,766 + AZOBR_RS31375 0.29 -0.4 406,767 - AZOBR_RS31375 0.29 +2.0 406,767 - AZOBR_RS31375 0.29 -0.8 406,905 - AZOBR_RS31375 0.39 -0.4 406,955 + AZOBR_RS31375 0.42 +1.2 406,956 - AZOBR_RS31375 0.42 +0.5 407,420 + AZOBR_RS31375 0.73 +0.4 407,574 + AZOBR_RS31375 0.84 -0.7 407,574 + AZOBR_RS31375 0.84 -3.1 407,574 + AZOBR_RS31375 0.84 -0.2 407,574 + AZOBR_RS31375 0.84 -0.1 407,575 - AZOBR_RS31375 0.84 -0.3 407,575 - AZOBR_RS31375 0.84 -1.0 407,575 - AZOBR_RS31375 0.84 -1.9 407,575 - AZOBR_RS31375 0.84 -1.1 407,576 + AZOBR_RS31375 0.84 +0.5 407,576 + AZOBR_RS31375 0.84 -0.4 407,576 + AZOBR_RS31375 0.84 +0.1 407,577 - AZOBR_RS31375 0.84 -0.4 407,681 + +1.3 407,681 + -2.6 407,682 - -0.2 407,756 + +1.5 407,756 + -0.7 407,756 + +2.1 407,828 + +2.1 407,829 - -1.0 407,837 + -0.5 407,837 + +1.6 407,837 + -0.3 407,837 + +0.2 407,837 + -1.0 407,837 + -0.2 407,837 + +0.6 407,838 - +1.5 407,838 - -0.0 407,838 - +0.4 407,838 - -1.4 408,467 + -0.7 408,468 - +1.3 408,555 + +0.2 408,558 + -0.3 408,558 + +2.2 408,559 - -0.8 408,725 + -0.3 408,728 + +0.8 408,729 - +0.2 408,791 - -0.4 408,814 + -2.8
Or see this region's nucleotide sequence