Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS28060 and AZOBR_RS28065 are separated by 22 nucleotides AZOBR_RS28065 and AZOBR_RS28070 overlap by 4 nucleotides AZOBR_RS28070 and AZOBR_RS28075 are separated by 7 nucleotides AZOBR_RS28075 and AZOBR_RS28080 are separated by 121 nucleotides
AZOBR_RS28060: AZOBR_RS28060 - hypothetical protein, at 463,944 to 464,495
_RS28060
AZOBR_RS28065: AZOBR_RS28065 - hypothetical protein, at 464,518 to 464,835
_RS28065
AZOBR_RS28070: AZOBR_RS28070 - hypothetical protein, at 464,832 to 465,290
_RS28070
AZOBR_RS28075: AZOBR_RS28075 - membrane protein, at 465,298 to 466,434
_RS28075
AZOBR_RS28080: AZOBR_RS28080 - GntR family transcriptional regulator, at 466,556 to 467,281
_RS28080
Position (kb) 465
466
467 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 464.520 kb on - strand at 464.520 kb on - strand at 464.579 kb on + strand, within AZOBR_RS28065 at 464.579 kb on + strand, within AZOBR_RS28065 at 464.579 kb on + strand, within AZOBR_RS28065 at 464.579 kb on + strand, within AZOBR_RS28065 at 464.580 kb on - strand, within AZOBR_RS28065 at 464.580 kb on - strand, within AZOBR_RS28065 at 464.580 kb on - strand, within AZOBR_RS28065 at 464.580 kb on - strand, within AZOBR_RS28065 at 464.762 kb on + strand, within AZOBR_RS28065 at 465.080 kb on - strand, within AZOBR_RS28070 at 465.136 kb on - strand, within AZOBR_RS28070 at 465.285 kb on - strand at 465.285 kb on - strand at 465.569 kb on + strand, within AZOBR_RS28075 at 465.570 kb on - strand, within AZOBR_RS28075 at 465.570 kb on - strand, within AZOBR_RS28075 at 465.570 kb on - strand, within AZOBR_RS28075 at 465.570 kb on - strand, within AZOBR_RS28075 at 465.570 kb on - strand, within AZOBR_RS28075 at 465.570 kb on - strand, within AZOBR_RS28075 at 465.623 kb on + strand, within AZOBR_RS28075 at 465.624 kb on - strand, within AZOBR_RS28075 at 465.624 kb on - strand, within AZOBR_RS28075 at 465.648 kb on - strand, within AZOBR_RS28075 at 465.806 kb on + strand, within AZOBR_RS28075 at 465.806 kb on + strand, within AZOBR_RS28075 at 465.807 kb on - strand, within AZOBR_RS28075 at 465.807 kb on - strand, within AZOBR_RS28075 at 465.932 kb on + strand, within AZOBR_RS28075 at 465.933 kb on - strand, within AZOBR_RS28075 at 465.933 kb on - strand, within AZOBR_RS28075 at 465.956 kb on + strand, within AZOBR_RS28075 at 465.957 kb on - strand, within AZOBR_RS28075 at 466.016 kb on + strand, within AZOBR_RS28075 at 466.017 kb on - strand, within AZOBR_RS28075 at 466.788 kb on + strand, within AZOBR_RS28080
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 464,520 - -1.3 464,520 - +0.2 464,579 + AZOBR_RS28065 0.19 -1.1 464,579 + AZOBR_RS28065 0.19 +0.3 464,579 + AZOBR_RS28065 0.19 -0.2 464,579 + AZOBR_RS28065 0.19 +0.6 464,580 - AZOBR_RS28065 0.19 +0.6 464,580 - AZOBR_RS28065 0.19 -0.0 464,580 - AZOBR_RS28065 0.19 -1.0 464,580 - AZOBR_RS28065 0.19 -0.5 464,762 + AZOBR_RS28065 0.77 -0.7 465,080 - AZOBR_RS28070 0.54 +0.2 465,136 - AZOBR_RS28070 0.66 -0.1 465,285 - -1.1 465,285 - -0.0 465,569 + AZOBR_RS28075 0.24 -0.1 465,570 - AZOBR_RS28075 0.24 -3.9 465,570 - AZOBR_RS28075 0.24 -1.1 465,570 - AZOBR_RS28075 0.24 -0.2 465,570 - AZOBR_RS28075 0.24 -1.1 465,570 - AZOBR_RS28075 0.24 +1.0 465,570 - AZOBR_RS28075 0.24 -1.5 465,623 + AZOBR_RS28075 0.29 -1.4 465,624 - AZOBR_RS28075 0.29 -1.1 465,624 - AZOBR_RS28075 0.29 -0.2 465,648 - AZOBR_RS28075 0.31 -1.3 465,806 + AZOBR_RS28075 0.45 -1.2 465,806 + AZOBR_RS28075 0.45 -0.3 465,807 - AZOBR_RS28075 0.45 +0.1 465,807 - AZOBR_RS28075 0.45 -0.5 465,932 + AZOBR_RS28075 0.56 +0.1 465,933 - AZOBR_RS28075 0.56 -0.4 465,933 - AZOBR_RS28075 0.56 +1.9 465,956 + AZOBR_RS28075 0.58 -0.1 465,957 - AZOBR_RS28075 0.58 +0.3 466,016 + AZOBR_RS28075 0.63 -0.3 466,017 - AZOBR_RS28075 0.63 +2.7 466,788 + AZOBR_RS28080 0.32 +0.3
Or see this region's nucleotide sequence