Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26625 and AZOBR_RS26630 are separated by 65 nucleotides AZOBR_RS26630 and AZOBR_RS26635 are separated by 32 nucleotides
AZOBR_RS26625: AZOBR_RS26625 - dehydroascorbate transporter, at 117,927 to 119,210
_RS26625
AZOBR_RS26630: AZOBR_RS26630 - ABC transporter permease, at 119,276 to 119,785
_RS26630
AZOBR_RS26635: AZOBR_RS26635 - mandelate racemase, at 119,818 to 120,999
_RS26635
Position (kb) 119
120 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 118.417 kb on + strand, within AZOBR_RS26625 at 118.472 kb on - strand, within AZOBR_RS26625 at 118.472 kb on - strand, within AZOBR_RS26625 at 118.735 kb on + strand, within AZOBR_RS26625 at 118.736 kb on - strand, within AZOBR_RS26625 at 118.819 kb on + strand, within AZOBR_RS26625 at 118.820 kb on - strand, within AZOBR_RS26625 at 119.391 kb on + strand, within AZOBR_RS26630 at 119.391 kb on + strand, within AZOBR_RS26630 at 119.391 kb on + strand, within AZOBR_RS26630 at 119.843 kb on + strand at 120.017 kb on + strand, within AZOBR_RS26635 at 120.017 kb on + strand, within AZOBR_RS26635 at 120.227 kb on + strand, within AZOBR_RS26635 at 120.228 kb on - strand, within AZOBR_RS26635 at 120.377 kb on + strand at 120.378 kb on - strand, within AZOBR_RS26635 at 120.378 kb on - strand, within AZOBR_RS26635 at 120.566 kb on + strand, within AZOBR_RS26635 at 120.567 kb on - strand, within AZOBR_RS26635 at 120.578 kb on + strand, within AZOBR_RS26635 at 120.578 kb on + strand, within AZOBR_RS26635 at 120.579 kb on - strand, within AZOBR_RS26635 at 120.708 kb on - strand, within AZOBR_RS26635 at 120.708 kb on - strand, within AZOBR_RS26635 at 120.708 kb on - strand, within AZOBR_RS26635 at 120.743 kb on + strand, within AZOBR_RS26635 at 120.743 kb on + strand, within AZOBR_RS26635 at 120.744 kb on - strand, within AZOBR_RS26635
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 118,417 + AZOBR_RS26625 0.38 -0.7 118,472 - AZOBR_RS26625 0.42 -0.3 118,472 - AZOBR_RS26625 0.42 +3.7 118,735 + AZOBR_RS26625 0.63 -1.6 118,736 - AZOBR_RS26625 0.63 +2.2 118,819 + AZOBR_RS26625 0.69 -1.8 118,820 - AZOBR_RS26625 0.70 +0.3 119,391 + AZOBR_RS26630 0.23 +0.2 119,391 + AZOBR_RS26630 0.23 -0.7 119,391 + AZOBR_RS26630 0.23 -0.2 119,843 + -2.1 120,017 + AZOBR_RS26635 0.17 -0.1 120,017 + AZOBR_RS26635 0.17 +0.8 120,227 + AZOBR_RS26635 0.35 -1.9 120,228 - AZOBR_RS26635 0.35 +1.0 120,377 + +2.2 120,378 - AZOBR_RS26635 0.47 +0.8 120,378 - AZOBR_RS26635 0.47 -0.9 120,566 + AZOBR_RS26635 0.63 +0.2 120,567 - AZOBR_RS26635 0.63 -1.2 120,578 + AZOBR_RS26635 0.64 -0.1 120,578 + AZOBR_RS26635 0.64 +2.2 120,579 - AZOBR_RS26635 0.64 -0.2 120,708 - AZOBR_RS26635 0.75 -0.2 120,708 - AZOBR_RS26635 0.75 -0.3 120,708 - AZOBR_RS26635 0.75 -0.1 120,743 + AZOBR_RS26635 0.78 -2.4 120,743 + AZOBR_RS26635 0.78 +1.4 120,744 - AZOBR_RS26635 0.78 -1.0
Or see this region's nucleotide sequence