Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25850 and AZOBR_RS25855 overlap by 4 nucleotides AZOBR_RS25855 and AZOBR_RS25860 are separated by 367 nucleotides AZOBR_RS25860 and AZOBR_RS25865 are separated by 40 nucleotides
AZOBR_RS25850: AZOBR_RS25850 - putative Phenylalanine racemase (ATP-hydrolyzing), at 851,493 to 853,703
_RS25850
AZOBR_RS25855: AZOBR_RS25855 - amino acid adenylation (fragment), at 853,700 to 857,362
_RS25855
AZOBR_RS25860: AZOBR_RS25860 - hypothetical protein, at 857,730 to 857,933
_RS25860
AZOBR_RS25865: AZOBR_RS25865 - alkaline phosphatase, at 857,974 to 858,579
_RS25865
Position (kb) 853
854
855
856
857
858 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 853.264 kb on + strand, within AZOBR_RS25850 at 853.384 kb on + strand, within AZOBR_RS25850 at 853.384 kb on + strand, within AZOBR_RS25850 at 853.385 kb on - strand, within AZOBR_RS25850 at 853.385 kb on - strand, within AZOBR_RS25850 at 853.385 kb on - strand, within AZOBR_RS25850 at 853.666 kb on + strand at 853.666 kb on + strand at 853.666 kb on + strand at 853.666 kb on + strand at 853.666 kb on + strand at 853.666 kb on + strand at 853.667 kb on - strand at 853.667 kb on - strand at 853.667 kb on - strand at 853.667 kb on - strand at 853.667 kb on - strand at 853.667 kb on - strand at 853.675 kb on + strand at 853.676 kb on - strand at 853.676 kb on - strand at 853.835 kb on - strand at 853.836 kb on + strand at 853.836 kb on + strand at 853.836 kb on + strand at 853.836 kb on + strand at 853.836 kb on + strand at 853.837 kb on - strand at 853.837 kb on - strand at 853.837 kb on - strand at 853.837 kb on - strand at 853.837 kb on - strand at 854.025 kb on + strand at 854.025 kb on + strand at 855.889 kb on + strand, within AZOBR_RS25855 at 855.889 kb on + strand, within AZOBR_RS25855 at 855.889 kb on + strand, within AZOBR_RS25855 at 855.889 kb on + strand, within AZOBR_RS25855 at 855.890 kb on - strand, within AZOBR_RS25855 at 855.890 kb on - strand, within AZOBR_RS25855 at 855.890 kb on - strand, within AZOBR_RS25855 at 855.891 kb on + strand, within AZOBR_RS25855 at 855.891 kb on + strand, within AZOBR_RS25855 at 855.891 kb on + strand, within AZOBR_RS25855 at 855.891 kb on + strand, within AZOBR_RS25855 at 855.891 kb on + strand, within AZOBR_RS25855 at 855.891 kb on + strand, within AZOBR_RS25855 at 855.891 kb on + strand, within AZOBR_RS25855 at 855.892 kb on - strand, within AZOBR_RS25855 at 855.892 kb on - strand, within AZOBR_RS25855 at 855.892 kb on - strand, within AZOBR_RS25855 at 855.892 kb on - strand, within AZOBR_RS25855 at 855.892 kb on - strand, within AZOBR_RS25855 at 855.892 kb on - strand, within AZOBR_RS25855 at 855.892 kb on - strand, within AZOBR_RS25855 at 856.204 kb on + strand, within AZOBR_RS25855 at 856.209 kb on + strand, within AZOBR_RS25855 at 856.407 kb on + strand, within AZOBR_RS25855 at 856.425 kb on + strand, within AZOBR_RS25855 at 856.425 kb on + strand, within AZOBR_RS25855 at 856.425 kb on + strand, within AZOBR_RS25855 at 856.425 kb on + strand, within AZOBR_RS25855 at 856.426 kb on - strand, within AZOBR_RS25855 at 856.515 kb on + strand, within AZOBR_RS25855 at 856.515 kb on + strand, within AZOBR_RS25855 at 856.516 kb on - strand, within AZOBR_RS25855 at 856.559 kb on - strand, within AZOBR_RS25855 at 856.559 kb on - strand, within AZOBR_RS25855 at 856.611 kb on + strand, within AZOBR_RS25855 at 856.611 kb on + strand, within AZOBR_RS25855 at 856.611 kb on + strand, within AZOBR_RS25855 at 856.611 kb on + strand, within AZOBR_RS25855 at 856.611 kb on + strand, within AZOBR_RS25855 at 856.611 kb on + strand, within AZOBR_RS25855 at 857.049 kb on + strand at 857.049 kb on + strand at 857.049 kb on + strand at 857.049 kb on + strand at 857.049 kb on + strand at 857.049 kb on + strand at 857.049 kb on + strand at 857.050 kb on - strand at 857.050 kb on - strand at 857.627 kb on + strand at 857.627 kb on + strand at 857.628 kb on - strand at 858.012 kb on - strand at 858.017 kb on + strand at 858.083 kb on + strand, within AZOBR_RS25865 at 858.084 kb on - strand, within AZOBR_RS25865 at 858.101 kb on + strand, within AZOBR_RS25865 at 858.101 kb on + strand, within AZOBR_RS25865
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 853,264 + AZOBR_RS25850 0.80 -2.0 853,384 + AZOBR_RS25850 0.86 -0.0 853,384 + AZOBR_RS25850 0.86 +0.4 853,385 - AZOBR_RS25850 0.86 -2.5 853,385 - AZOBR_RS25850 0.86 +1.1 853,385 - AZOBR_RS25850 0.86 +1.0 853,666 + +0.3 853,666 + -0.7 853,666 + -0.2 853,666 + -0.0 853,666 + -1.3 853,666 + -1.8 853,667 - +0.5 853,667 - -0.1 853,667 - +0.6 853,667 - -0.7 853,667 - -0.4 853,667 - -1.4 853,675 + +0.4 853,676 - +0.0 853,676 - +0.3 853,835 - +1.6 853,836 + -0.1 853,836 + +1.4 853,836 + +0.1 853,836 + +0.7 853,836 + +0.8 853,837 - +0.7 853,837 - -1.1 853,837 - -0.1 853,837 - +0.0 853,837 - -1.7 854,025 + +0.4 854,025 + -0.0 855,889 + AZOBR_RS25855 0.60 +0.6 855,889 + AZOBR_RS25855 0.60 -0.3 855,889 + AZOBR_RS25855 0.60 -1.1 855,889 + AZOBR_RS25855 0.60 +0.2 855,890 - AZOBR_RS25855 0.60 -0.6 855,890 - AZOBR_RS25855 0.60 -0.5 855,890 - AZOBR_RS25855 0.60 -0.1 855,891 + AZOBR_RS25855 0.60 -0.4 855,891 + AZOBR_RS25855 0.60 -1.4 855,891 + AZOBR_RS25855 0.60 -0.4 855,891 + AZOBR_RS25855 0.60 -0.6 855,891 + AZOBR_RS25855 0.60 +0.4 855,891 + AZOBR_RS25855 0.60 +0.1 855,891 + AZOBR_RS25855 0.60 +0.4 855,892 - AZOBR_RS25855 0.60 -1.1 855,892 - AZOBR_RS25855 0.60 +0.6 855,892 - AZOBR_RS25855 0.60 +0.3 855,892 - AZOBR_RS25855 0.60 -0.9 855,892 - AZOBR_RS25855 0.60 -1.5 855,892 - AZOBR_RS25855 0.60 +0.7 855,892 - AZOBR_RS25855 0.60 +0.7 856,204 + AZOBR_RS25855 0.68 +1.8 856,209 + AZOBR_RS25855 0.68 +0.4 856,407 + AZOBR_RS25855 0.74 +0.6 856,425 + AZOBR_RS25855 0.74 +1.5 856,425 + AZOBR_RS25855 0.74 +0.2 856,425 + AZOBR_RS25855 0.74 +0.0 856,425 + AZOBR_RS25855 0.74 -1.2 856,426 - AZOBR_RS25855 0.74 +0.9 856,515 + AZOBR_RS25855 0.77 +2.0 856,515 + AZOBR_RS25855 0.77 -0.4 856,516 - AZOBR_RS25855 0.77 -0.7 856,559 - AZOBR_RS25855 0.78 +0.8 856,559 - AZOBR_RS25855 0.78 -0.7 856,611 + AZOBR_RS25855 0.79 +0.2 856,611 + AZOBR_RS25855 0.79 -0.6 856,611 + AZOBR_RS25855 0.79 +1.1 856,611 + AZOBR_RS25855 0.79 -1.0 856,611 + AZOBR_RS25855 0.79 +1.1 856,611 + AZOBR_RS25855 0.79 -0.6 857,049 + -0.2 857,049 + +1.0 857,049 + -3.5 857,049 + -0.3 857,049 + +1.0 857,049 + +1.9 857,049 + +0.1 857,050 - -1.3 857,050 - +0.6 857,627 + +0.3 857,627 + +0.4 857,628 - +1.6 858,012 - -0.6 858,017 + -2.1 858,083 + AZOBR_RS25865 0.18 -0.9 858,084 - AZOBR_RS25865 0.18 +0.6 858,101 + AZOBR_RS25865 0.21 -0.1 858,101 + AZOBR_RS25865 0.21 -0.5
Or see this region's nucleotide sequence