Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16510 and AZOBR_RS16515 are separated by 7 nucleotides AZOBR_RS16515 and AZOBR_RS16520 are separated by 130 nucleotides
AZOBR_RS16510: AZOBR_RS16510 - S-formylglutathione hydrolase, at 454,783 to 455,646
_RS16510
AZOBR_RS16515: AZOBR_RS16515 - S-(hydroxymethyl)glutathione dehydrogenase, at 455,654 to 456,772
_RS16515
AZOBR_RS16520: AZOBR_RS16520 - LysR family transcriptional regulator, at 456,903 to 457,820
_RS16520
Position (kb) 455
456
457 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 454.735 kb on + strand at 454.736 kb on - strand at 454.736 kb on - strand at 454.764 kb on + strand at 454.765 kb on - strand at 454.850 kb on + strand at 454.850 kb on + strand at 454.851 kb on - strand at 455.043 kb on - strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.259 kb on - strand, within AZOBR_RS16510 at 455.259 kb on - strand, within AZOBR_RS16510 at 455.259 kb on - strand, within AZOBR_RS16510 at 455.483 kb on + strand, within AZOBR_RS16510 at 455.537 kb on + strand, within AZOBR_RS16510 at 455.537 kb on + strand, within AZOBR_RS16510 at 455.538 kb on - strand, within AZOBR_RS16510 at 455.538 kb on - strand, within AZOBR_RS16510 at 455.664 kb on + strand at 455.665 kb on - strand at 455.793 kb on + strand, within AZOBR_RS16515 at 455.794 kb on - strand, within AZOBR_RS16515 at 455.995 kb on - strand, within AZOBR_RS16515 at 456.048 kb on + strand, within AZOBR_RS16515 at 456.048 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.636 kb on + strand, within AZOBR_RS16515 at 456.636 kb on + strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 457.051 kb on - strand, within AZOBR_RS16520 at 457.207 kb on - strand, within AZOBR_RS16520 at 457.413 kb on + strand, within AZOBR_RS16520 at 457.645 kb on - strand, within AZOBR_RS16520 at 457.645 kb on - strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.731 kb on + strand at 457.732 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 454,735 + +1.3 454,736 - -0.6 454,736 - -0.7 454,764 + -0.0 454,765 - +0.0 454,850 + -1.4 454,850 + +0.9 454,851 - -0.9 455,043 - AZOBR_RS16510 0.30 -1.6 455,258 + AZOBR_RS16510 0.55 -1.6 455,258 + AZOBR_RS16510 0.55 +0.3 455,258 + AZOBR_RS16510 0.55 +0.4 455,258 + AZOBR_RS16510 0.55 +0.1 455,258 + AZOBR_RS16510 0.55 +0.0 455,259 - AZOBR_RS16510 0.55 -0.0 455,259 - AZOBR_RS16510 0.55 +0.1 455,259 - AZOBR_RS16510 0.55 +0.3 455,483 + AZOBR_RS16510 0.81 -0.7 455,537 + AZOBR_RS16510 0.87 -2.2 455,537 + AZOBR_RS16510 0.87 +0.5 455,538 - AZOBR_RS16510 0.87 +0.2 455,538 - AZOBR_RS16510 0.87 +1.8 455,664 + -0.4 455,665 - +0.5 455,793 + AZOBR_RS16515 0.12 +0.2 455,794 - AZOBR_RS16515 0.13 -1.4 455,995 - AZOBR_RS16515 0.30 -0.5 456,048 + AZOBR_RS16515 0.35 -0.0 456,048 + AZOBR_RS16515 0.35 +0.1 456,366 + AZOBR_RS16515 0.64 -1.0 456,366 + AZOBR_RS16515 0.64 +2.1 456,366 + AZOBR_RS16515 0.64 +0.4 456,366 + AZOBR_RS16515 0.64 +0.9 456,366 + AZOBR_RS16515 0.64 -2.1 456,367 - AZOBR_RS16515 0.64 +0.3 456,367 - AZOBR_RS16515 0.64 -1.9 456,367 - AZOBR_RS16515 0.64 -0.2 456,367 - AZOBR_RS16515 0.64 -0.4 456,367 - AZOBR_RS16515 0.64 -0.3 456,367 - AZOBR_RS16515 0.64 -0.2 456,636 + AZOBR_RS16515 0.88 +1.3 456,636 + AZOBR_RS16515 0.88 -2.0 456,637 - AZOBR_RS16515 0.88 -0.1 456,637 - AZOBR_RS16515 0.88 -0.0 456,637 - AZOBR_RS16515 0.88 +1.7 456,637 - AZOBR_RS16515 0.88 +0.6 457,051 - AZOBR_RS16520 0.16 +1.1 457,207 - AZOBR_RS16520 0.33 -1.0 457,413 + AZOBR_RS16520 0.56 -1.0 457,645 - AZOBR_RS16520 0.81 -0.6 457,645 - AZOBR_RS16520 0.81 -1.3 457,647 + AZOBR_RS16520 0.81 -3.3 457,647 + AZOBR_RS16520 0.81 -0.1 457,647 + AZOBR_RS16520 0.81 -0.9 457,647 + AZOBR_RS16520 0.81 -0.7 457,647 + AZOBR_RS16520 0.81 +0.1 457,648 - AZOBR_RS16520 0.81 +0.2 457,648 - AZOBR_RS16520 0.81 -0.2 457,648 - AZOBR_RS16520 0.81 -0.6 457,648 - AZOBR_RS16520 0.81 -0.3 457,731 + -0.2 457,732 - -0.8
Or see this region's nucleotide sequence