Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25455 and AO356_25460 are separated by 196 nucleotides AO356_25460 and AO356_25465 are separated by 111 nucleotides
AO356_25455: AO356_25455 - transcriptional regulator, at 5,755,121 to 5,756,140
_25455
AO356_25460: AO356_25460 - sulfonate ABC transporter substrate-binding protein, at 5,756,337 to 5,757,344
_25460
AO356_25465: AO356_25465 - AraC family transcriptional regulator, at 5,757,456 to 5,758,448
_25465
Position (kb) 5756
5757
5758 Strain fitness (log2 ratio) -1
0
1
2 at 5756.075 kb on + strand at 5756.237 kb on + strand at 5756.238 kb on - strand at 5756.238 kb on - strand at 5756.238 kb on - strand at 5756.238 kb on - strand at 5756.695 kb on - strand, within AO356_25460 at 5756.946 kb on + strand, within AO356_25460 at 5756.991 kb on + strand, within AO356_25460 at 5756.991 kb on + strand, within AO356_25460 at 5756.992 kb on - strand, within AO356_25460 at 5756.992 kb on - strand, within AO356_25460 at 5756.992 kb on - strand, within AO356_25460 at 5757.030 kb on + strand, within AO356_25460 at 5757.069 kb on + strand, within AO356_25460 at 5757.070 kb on - strand, within AO356_25460 at 5757.081 kb on + strand, within AO356_25460 at 5757.081 kb on + strand, within AO356_25460 at 5757.081 kb on + strand, within AO356_25460 at 5757.082 kb on - strand, within AO356_25460 at 5757.082 kb on - strand, within AO356_25460 at 5757.144 kb on + strand, within AO356_25460 at 5757.144 kb on + strand, within AO356_25460 at 5757.144 kb on + strand, within AO356_25460 at 5757.144 kb on + strand, within AO356_25460 at 5757.145 kb on - strand, within AO356_25460 at 5757.145 kb on - strand, within AO356_25460 at 5757.155 kb on - strand, within AO356_25460 at 5757.240 kb on + strand, within AO356_25460 at 5757.240 kb on + strand, within AO356_25460 at 5757.241 kb on - strand, within AO356_25460 at 5757.241 kb on - strand, within AO356_25460 at 5757.246 kb on + strand at 5757.246 kb on + strand at 5757.247 kb on - strand at 5757.247 kb on - strand at 5757.247 kb on - strand at 5757.247 kb on - strand at 5757.247 kb on - strand at 5757.343 kb on - strand at 5757.665 kb on + strand, within AO356_25465 at 5757.666 kb on - strand, within AO356_25465 at 5757.782 kb on - strand, within AO356_25465 at 5757.800 kb on + strand, within AO356_25465 at 5757.800 kb on + strand, within AO356_25465 at 5757.908 kb on + strand, within AO356_25465 at 5758.146 kb on + strand, within AO356_25465 at 5758.227 kb on + strand, within AO356_25465 at 5758.246 kb on + strand, within AO356_25465
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 5,756,075 + -0.2 5,756,237 + +1.3 5,756,238 - +0.9 5,756,238 - -0.2 5,756,238 - -0.5 5,756,238 - -0.4 5,756,695 - AO356_25460 0.36 +1.2 5,756,946 + AO356_25460 0.60 +0.3 5,756,991 + AO356_25460 0.65 +1.1 5,756,991 + AO356_25460 0.65 -0.2 5,756,992 - AO356_25460 0.65 +0.9 5,756,992 - AO356_25460 0.65 -0.6 5,756,992 - AO356_25460 0.65 +0.4 5,757,030 + AO356_25460 0.69 +1.1 5,757,069 + AO356_25460 0.73 +0.1 5,757,070 - AO356_25460 0.73 +0.5 5,757,081 + AO356_25460 0.74 +0.7 5,757,081 + AO356_25460 0.74 +1.9 5,757,081 + AO356_25460 0.74 +0.9 5,757,082 - AO356_25460 0.74 +0.1 5,757,082 - AO356_25460 0.74 -0.0 5,757,144 + AO356_25460 0.80 +0.1 5,757,144 + AO356_25460 0.80 +0.2 5,757,144 + AO356_25460 0.80 -0.9 5,757,144 + AO356_25460 0.80 +1.1 5,757,145 - AO356_25460 0.80 +0.5 5,757,145 - AO356_25460 0.80 +0.2 5,757,155 - AO356_25460 0.81 -0.1 5,757,240 + AO356_25460 0.90 +1.2 5,757,240 + AO356_25460 0.90 -0.2 5,757,241 - AO356_25460 0.90 +0.5 5,757,241 - AO356_25460 0.90 +0.3 5,757,246 + +0.1 5,757,246 + -0.4 5,757,247 - -0.8 5,757,247 - -0.7 5,757,247 - +0.3 5,757,247 - +0.3 5,757,247 - +0.2 5,757,343 - +0.6 5,757,665 + AO356_25465 0.21 +1.1 5,757,666 - AO356_25465 0.21 +0.4 5,757,782 - AO356_25465 0.33 +0.4 5,757,800 + AO356_25465 0.35 -0.4 5,757,800 + AO356_25465 0.35 +0.6 5,757,908 + AO356_25465 0.46 +0.8 5,758,146 + AO356_25465 0.69 +0.9 5,758,227 + AO356_25465 0.78 -0.6 5,758,246 + AO356_25465 0.80 -0.7
Or see this region's nucleotide sequence