Experiment: 10 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0134 and DvMF_0135 are separated by 113 nucleotides DvMF_0135 and DvMF_0136 overlap by 1 nucleotides DvMF_0136 and DvMF_0137 are separated by 247 nucleotides
DvMF_0134: DvMF_0134 - hypothetical protein (RefSeq), at 149,783 to 150,322
_0134
DvMF_0135: DvMF_0135 - Haloacid dehalogenase domain protein hydrolase (RefSeq), at 150,436 to 151,254
_0135
DvMF_0136: DvMF_0136 - hypothetical protein (RefSeq), at 151,254 to 152,498
_0136
DvMF_0137: DvMF_0137 - UDP-glucose 4-epimerase (RefSeq), at 152,746 to 153,816
_0137
Position (kb)
151
152
153 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 150.362 kb on - strand at 150.410 kb on - strand at 150.426 kb on + strand at 150.545 kb on - strand, within DvMF_0135 at 150.705 kb on - strand, within DvMF_0135 at 150.801 kb on + strand, within DvMF_0135 at 151.032 kb on + strand, within DvMF_0135 at 151.045 kb on + strand, within DvMF_0135 at 151.045 kb on + strand, within DvMF_0135 at 151.334 kb on - strand at 151.433 kb on - strand, within DvMF_0136 at 151.500 kb on - strand, within DvMF_0136 at 151.521 kb on + strand, within DvMF_0136 at 151.521 kb on + strand, within DvMF_0136 at 151.561 kb on + strand, within DvMF_0136 at 151.561 kb on + strand, within DvMF_0136 at 151.588 kb on - strand, within DvMF_0136 at 151.593 kb on + strand, within DvMF_0136 at 151.717 kb on - strand, within DvMF_0136 at 151.758 kb on - strand, within DvMF_0136 at 151.776 kb on - strand, within DvMF_0136 at 151.863 kb on - strand, within DvMF_0136 at 152.025 kb on + strand, within DvMF_0136 at 152.119 kb on - strand, within DvMF_0136 at 152.129 kb on - strand, within DvMF_0136 at 152.406 kb on - strand at 152.732 kb on + strand at 152.775 kb on + strand at 152.793 kb on - strand at 152.867 kb on - strand, within DvMF_0137 at 153.031 kb on + strand, within DvMF_0137 at 153.142 kb on - strand, within DvMF_0137 at 153.364 kb on + strand, within DvMF_0137 at 153.421 kb on - strand, within DvMF_0137
Per-strain Table
Position Strand Gene LocusTag Fraction 10 day starvation, 37C remove 150,362 - -0.1 150,410 - +0.3 150,426 + +1.5 150,545 - DvMF_0135 0.13 -0.1 150,705 - DvMF_0135 0.33 -1.0 150,801 + DvMF_0135 0.45 +0.9 151,032 + DvMF_0135 0.73 +0.9 151,045 + DvMF_0135 0.74 +0.5 151,045 + DvMF_0135 0.74 +0.7 151,334 - +0.2 151,433 - DvMF_0136 0.14 +0.8 151,500 - DvMF_0136 0.20 +0.0 151,521 + DvMF_0136 0.21 +0.8 151,521 + DvMF_0136 0.21 +0.9 151,561 + DvMF_0136 0.25 +1.2 151,561 + DvMF_0136 0.25 +1.5 151,588 - DvMF_0136 0.27 +0.8 151,593 + DvMF_0136 0.27 +1.1 151,717 - DvMF_0136 0.37 +0.7 151,758 - DvMF_0136 0.40 +0.1 151,776 - DvMF_0136 0.42 +0.3 151,863 - DvMF_0136 0.49 +1.1 152,025 + DvMF_0136 0.62 +0.9 152,119 - DvMF_0136 0.69 +0.7 152,129 - DvMF_0136 0.70 +0.7 152,406 - +0.8 152,732 + +0.5 152,775 + -0.1 152,793 - -0.1 152,867 - DvMF_0137 0.11 -3.6 153,031 + DvMF_0137 0.27 -3.8 153,142 - DvMF_0137 0.37 -1.6 153,364 + DvMF_0137 0.58 -0.1 153,421 - DvMF_0137 0.63 -0.1
Or see this region's nucleotide sequence