Experiment: Zinc 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3791 and Shew_3792 are separated by 779 nucleotides Shew_3792 and Shew_3793 are separated by 32 nucleotides
Shew_3791: Shew_3791 - hypothetical protein (RefSeq), at 4,510,807 to 4,511,463
_3791
Shew_3792: Shew_3792 - hypothetical protein (RefSeq), at 4,512,243 to 4,512,614
_3792
Shew_3793: Shew_3793 - hypothetical protein (RefSeq), at 4,512,647 to 4,513,786
_3793
Position (kb) 4512
4513 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4511.366 kb on + strand, within Shew_3791 at 4511.374 kb on - strand, within Shew_3791 at 4511.374 kb on - strand, within Shew_3791 at 4511.374 kb on - strand, within Shew_3791 at 4511.507 kb on + strand at 4511.507 kb on + strand at 4511.611 kb on - strand at 4511.976 kb on - strand at 4511.977 kb on + strand at 4512.197 kb on + strand at 4512.343 kb on + strand, within Shew_3792 at 4512.351 kb on - strand, within Shew_3792 at 4512.490 kb on - strand, within Shew_3792 at 4512.503 kb on - strand, within Shew_3792 at 4512.529 kb on - strand, within Shew_3792 at 4512.572 kb on - strand, within Shew_3792 at 4512.577 kb on - strand at 4512.642 kb on - strand at 4512.945 kb on + strand, within Shew_3793 at 4513.033 kb on - strand, within Shew_3793 at 4513.153 kb on - strand, within Shew_3793 at 4513.153 kb on - strand, within Shew_3793 at 4513.293 kb on - strand, within Shew_3793 at 4513.315 kb on + strand, within Shew_3793 at 4513.521 kb on + strand, within Shew_3793 at 4513.529 kb on - strand, within Shew_3793
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.8 mM remove 4,511,366 + Shew_3791 0.85 -0.5 4,511,374 - Shew_3791 0.86 -0.4 4,511,374 - Shew_3791 0.86 +0.4 4,511,374 - Shew_3791 0.86 -0.3 4,511,507 + -0.9 4,511,507 + +0.0 4,511,611 - +0.6 4,511,976 - +0.4 4,511,977 + -0.6 4,512,197 + +0.0 4,512,343 + Shew_3792 0.27 +0.6 4,512,351 - Shew_3792 0.29 -0.1 4,512,490 - Shew_3792 0.66 +0.0 4,512,503 - Shew_3792 0.70 +0.1 4,512,529 - Shew_3792 0.77 +2.8 4,512,572 - Shew_3792 0.88 +0.9 4,512,577 - -0.2 4,512,642 - +0.6 4,512,945 + Shew_3793 0.26 -1.9 4,513,033 - Shew_3793 0.34 +0.5 4,513,153 - Shew_3793 0.44 +0.7 4,513,153 - Shew_3793 0.44 +0.2 4,513,293 - Shew_3793 0.57 +0.2 4,513,315 + Shew_3793 0.59 +0.5 4,513,521 + Shew_3793 0.77 +0.1 4,513,529 - Shew_3793 0.77 -0.2
Or see this region's nucleotide sequence