Experiment: Zinc 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_1281 and Shew_1282 are separated by 617 nucleotides Shew_1282 and Shew_1283 are separated by 127 nucleotides Shew_1283 and Shew_1284 are separated by 263 nucleotides
Shew_1281: Shew_1281 - hypothetical protein (RefSeq), at 1,481,125 to 1,481,868
_1281
Shew_1282: Shew_1282 - hypothetical protein (RefSeq), at 1,482,486 to 1,482,710
_1282
Shew_1283: Shew_1283 - NrfJ-related protein (RefSeq), at 1,482,838 to 1,483,140
_1283
Shew_1284: Shew_1284 - GCN5-related N-acetyltransferase (RefSeq), at 1,483,404 to 1,483,904
_1284
Position (kb) 1482
1483 Strain fitness (log2 ratio) -1
0
1 at 1481.640 kb on - strand, within Shew_1281 at 1482.082 kb on + strand at 1482.464 kb on - strand at 1482.648 kb on + strand, within Shew_1282 at 1482.817 kb on - strand at 1483.173 kb on + strand at 1483.376 kb on + strand at 1483.453 kb on - strand at 1483.503 kb on + strand, within Shew_1284 at 1483.557 kb on + strand, within Shew_1284 at 1483.574 kb on + strand, within Shew_1284
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.8 mM remove 1,481,640 - Shew_1281 0.69 +0.4 1,482,082 + -0.0 1,482,464 - +0.6 1,482,648 + Shew_1282 0.72 -0.4 1,482,817 - -0.2 1,483,173 + +0.1 1,483,376 + -0.1 1,483,453 - +0.7 1,483,503 + Shew_1284 0.20 +0.3 1,483,557 + Shew_1284 0.31 +1.4 1,483,574 + Shew_1284 0.34 -0.4
Or see this region's nucleotide sequence