Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2049

Experiment: D-Cellobiose (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C); no added vitamins
2,151,933	+				+1.2
2,151,933	+				+1.1
2,151,933	+				-0.0
2,151,933	+				-0.6
2,151,934	-				-1.5
2,151,934	-				-0.4
2,151,934	-				-0.6
2,151,934	-				-0.7
2,151,934	-				+0.7
2,151,997	+				+1.4
2,151,997	+				+2.1
2,151,997	+				-2.0
2,151,998	-				+1.4
2,152,037	+				-0.1
2,152,037	+				+0.6
2,152,037	+				+0.6
2,152,037	+				+1.2
2,152,037	+				-0.4
2,152,038	-				+0.5
2,152,038	-				-0.2
2,152,038	-				+1.5
2,152,038	-				-3.5
2,152,038	-				+0.7
2,152,038	-				-1.5
2,152,038	-				+0.3
2,152,038	-				+0.0
2,152,038	-				+0.9
2,152,038	-				+0.6
2,152,038	-				+1.0
2,152,041	+				-1.0
2,152,042	+				+1.8
2,152,042	+				-0.9
2,152,042	+				-2.4
2,152,042	+				+1.1
2,152,042	+				-1.0
2,152,042	+				+1.8
2,152,042	+				+0.3
2,152,042	+				-1.1
2,152,042	+				-0.4
2,152,042	+				+1.2
2,152,042	+				+0.3
2,152,042	+				+0.8
2,152,042	+				+0.0
2,152,042	+				-0.1
2,152,043	-				+0.5
2,152,043	-				+1.7
2,152,043	-				+1.3
2,152,043	-				+2.6
2,152,043	-				+0.6
2,152,043	-				+0.2
2,152,043	-				-1.4
2,152,043	-				+1.0
2,152,043	-				-0.2
2,152,043	-				-0.5
2,152,043	-				+0.5
2,152,043	-				-0.3
2,152,043	-				-0.2
2,152,043	-				-1.1
2,152,043	-				-0.9
2,152,075	+				-0.2
2,152,075	+				+1.0
2,152,076	-				+0.6
2,152,220	-				-0.2
2,152,220	-				-1.7
2,152,220	-				-1.0
2,152,233	+				-0.9
2,152,324	+		Ga0059261_2048	0.15	-0.2
2,152,324	+		Ga0059261_2048	0.15	-0.9
2,152,324	+		Ga0059261_2048	0.15	-2.7
2,152,324	+		Ga0059261_2048	0.15	-0.5
2,152,324	+		Ga0059261_2048	0.15	-0.8
2,152,325	-		Ga0059261_2048	0.15	-1.1
2,152,325	-		Ga0059261_2048	0.15	-1.3
2,152,325	-		Ga0059261_2048	0.15	-0.4
2,152,334	+		Ga0059261_2048	0.17	-2.3
2,152,335	-		Ga0059261_2048	0.17	-1.1
2,152,354	+		Ga0059261_2048	0.20	-1.4
2,152,354	+		Ga0059261_2048	0.20	-1.1
2,152,354	+		Ga0059261_2048	0.20	-2.1
2,152,354	+		Ga0059261_2048	0.20	-2.7
2,152,355	-		Ga0059261_2048	0.20	-1.9
2,152,355	-		Ga0059261_2048	0.20	-3.0
2,152,355	-		Ga0059261_2048	0.20	-2.0
2,152,423	+		Ga0059261_2048	0.32	-1.3
2,152,423	+		Ga0059261_2048	0.32	+0.6
2,152,423	+		Ga0059261_2048	0.32	-0.7
2,152,423	+		Ga0059261_2048	0.32	-2.5
2,152,423	+		Ga0059261_2048	0.32	+0.3
2,152,423	+		Ga0059261_2048	0.32	-1.3
2,152,423	+		Ga0059261_2048	0.32	-0.9
2,152,424	-		Ga0059261_2048	0.32	-3.1
2,152,424	-		Ga0059261_2048	0.32	+0.4
2,152,424	-		Ga0059261_2048	0.32	+0.2
2,152,424	-		Ga0059261_2048	0.32	-2.6
2,152,424	-		Ga0059261_2048	0.32	-2.9
2,152,424	-		Ga0059261_2048	0.32	+0.1
2,152,424	-		Ga0059261_2048	0.32	-0.2
2,152,424	-		Ga0059261_2048	0.32	-0.4
2,152,424	-				-0.3
2,152,842	+				-4.1
2,152,842	+				-4.1
2,152,842	+				-5.2
2,152,842	+				-3.4
2,152,842	+				-4.9
2,152,842	+				-4.0
2,152,842	+				-3.3
2,152,842	+				-3.5
2,152,842	+				-1.6
2,152,843	-				-3.1
2,152,843	-				-4.1
2,152,843	-				-3.6
2,152,843	-				-3.0
2,152,896	+				-4.4
2,152,896	+				-5.1
2,152,897	-				-3.4
2,153,044	+		Ga0059261_2049	0.14	-0.8
2,153,044	+		Ga0059261_2049	0.14	-3.1
2,153,045	-		Ga0059261_2049	0.15	-4.6
2,153,091	+		Ga0059261_2049	0.18	-2.4
2,153,091	+		Ga0059261_2049	0.18	-4.7
2,153,091	+		Ga0059261_2049	0.18	-4.1
2,153,091	+		Ga0059261_2049	0.18	-2.0
2,153,091	+		Ga0059261_2049	0.18	-4.5
2,153,091	+		Ga0059261_2049	0.18	-2.7
2,153,091	+		Ga0059261_2049	0.18	-4.5
2,153,092	-		Ga0059261_2049	0.18	-4.3
2,153,092	-		Ga0059261_2049	0.18	-4.0
2,153,092	-		Ga0059261_2049	0.18	-2.5
2,153,092	-		Ga0059261_2049	0.18	-3.2
2,153,092	-		Ga0059261_2049	0.18	-3.7
2,153,092	-		Ga0059261_2049	0.18	-2.2
2,153,092	-		Ga0059261_2049	0.18	-4.1
2,153,092	-		Ga0059261_2049	0.18	-4.3
2,153,092	-		Ga0059261_2049	0.18	-4.9
2,153,092	-		Ga0059261_2049	0.18	-4.9
2,153,092	-		Ga0059261_2049	0.18	-2.3
2,153,092	-		Ga0059261_2049	0.18	-2.4
2,153,350	+		Ga0059261_2049	0.37	-0.3
2,153,548	+		Ga0059261_2049	0.51	-4.5
2,153,549	-		Ga0059261_2049	0.51	-1.3
2,153,785	+		Ga0059261_2049	0.68	-2.7
2,153,786	-		Ga0059261_2049	0.69	-3.9
2,154,087	+				-3.7
2,154,087	+				-4.6
2,154,088	-				-0.1
2,154,088	-				-2.2
2,154,212	+				+0.8
2,154,212	+				+0.9
2,154,212	+				+0.4
2,154,212	+				+2.7
2,154,212	+				+1.0
2,154,213	-				-1.4
2,154,213	-				-4.5
2,154,213	-				-1.2
2,154,213	-				-3.8
2,154,213	-				-2.0
2,154,213	-				-2.7
2,154,213	-				-2.7
2,154,213	-				-4.0
2,154,214	+				+1.8
2,154,214	+				+0.9
2,154,214	+				+1.1
2,154,214	+				+2.2
2,154,214	+				+1.9
2,154,214	+				+2.1
2,154,214	+				+1.1
2,154,214	+				+2.5
2,154,214	+				+1.4
2,154,214	+				+2.7
2,154,214	+				+2.0
2,154,214	+				+1.8
2,154,214	+				+2.4
2,154,214	+				+1.0
2,154,214	+				+1.0
2,154,214	+				+2.4
2,154,214	+				+2.5
2,154,214	+				+2.1
2,154,214	+				+0.2
2,154,214	+				+2.4
2,154,215	-				-1.2
2,154,215	-				-2.1
2,154,215	-				-2.6
2,154,215	-				-3.0
2,154,215	-				+1.5
2,154,215	-				-2.1
2,154,215	-				-3.1
2,154,215	-				-3.7
2,154,215	-				-3.4
2,154,215	-				-2.4
2,154,215	-				-1.5
2,154,215	-				-1.7
2,154,215	-				-3.0
2,154,215	-				-1.3
2,154,319	+		Ga0059261_2050	0.42	+1.6
2,154,319	+		Ga0059261_2050	0.42	+1.6
2,154,320	-		Ga0059261_2050	0.43	-2.2
2,154,320	-		Ga0059261_2050	0.43	-4.3
2,154,451	+				+0.0
2,154,452	-				-2.7
2,154,452	-				-2.5
2,154,560	+				-2.6
2,154,560	+				-3.2
2,154,560	+				-3.9
2,154,560	+				-3.1
2,154,560	+				-4.7
2,154,560	+				-3.6
2,154,560	+				-4.2
2,154,560	+				-2.0
2,154,560	+				-1.9
2,154,560	+				-3.6
2,154,560	+				-3.5
2,154,560	+				-1.2
2,154,560	+				-3.8
2,154,560	+				-4.5
2,154,560	+				-4.0
2,154,560	+				-1.8
2,154,560	+				-3.4
2,154,560	+				-1.2
2,154,561	-				-4.5
2,154,561	-				-3.2
2,154,561	-				-3.2
2,154,561	-				-3.5
2,154,561	-				-4.5
2,154,561	-				-1.4
2,154,561	-				-3.9
2,154,561	-				-6.4
2,154,561	-				-3.2
2,154,561	-				-0.1
2,154,561	-				-3.1
2,154,561	-				-3.1
2,154,561	-				-1.9
2,154,561	-				-1.3
2,154,561	-				-4.2
2,154,561	-				-3.7
2,154,561	-				-1.7
2,154,561	-				-4.1
2,154,566	+				-2.1
2,154,566	+				-1.8
2,154,566	+				-4.2
2,154,567	-				-1.7
2,154,567	-				-2.6
2,154,567	-				-2.0
2,154,702	-		Ga0059261_2051	0.18	-5.3
2,154,702	-		Ga0059261_2051	0.18	-4.1
2,154,702	-		Ga0059261_2051	0.18	-4.1
2,154,702	-		Ga0059261_2051	0.18	-3.5
2,155,115	+		Ga0059261_2051	0.51	-5.2
2,155,115	+		Ga0059261_2051	0.51	-4.4
2,155,116	-		Ga0059261_2051	0.51	-4.7
2,155,116	-		Ga0059261_2051	0.51	-4.3
2,155,116	-		Ga0059261_2051	0.51	-0.8
2,155,205	+		Ga0059261_2051	0.58	-4.0
2,155,205	+		Ga0059261_2051	0.58	-3.5
2,155,205	+		Ga0059261_2051	0.58	-3.1
2,155,205	+		Ga0059261_2051	0.58	-4.9
2,155,205	+		Ga0059261_2051	0.58	-4.8
2,155,205	+		Ga0059261_2051	0.58	-0.4
2,155,205	+		Ga0059261_2051	0.58	-2.0
2,155,206	-		Ga0059261_2051	0.58	-2.1
2,155,206	-		Ga0059261_2051	0.58	-2.2
2,155,206	-		Ga0059261_2051	0.58	-3.8
2,155,206	-		Ga0059261_2051	0.58	-4.0
2,155,206	-				-1.5