Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1048

Experiment: D-Cellobiose (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C); no added vitamins
1,080,236	+		Ga0059261_1046	0.60	-5.2
1,080,237	-		Ga0059261_1046	0.60	-3.0
1,080,297	+		Ga0059261_1046	0.70	-2.3
1,080,297	+		Ga0059261_1046	0.70	-3.6
1,080,297	+		Ga0059261_1046	0.70	-3.2
1,080,297	+		Ga0059261_1046	0.70	-3.6
1,080,298	-		Ga0059261_1046	0.71	-2.8
1,080,298	-		Ga0059261_1046	0.71	-3.5
1,080,318	+		Ga0059261_1046	0.74	-3.7
1,080,318	+		Ga0059261_1046	0.74	-4.0
1,080,318	+		Ga0059261_1046	0.74	-2.8
1,080,318	+		Ga0059261_1046	0.74	-3.9
1,080,319	-		Ga0059261_1046	0.74	-4.6
1,080,319	-		Ga0059261_1046	0.74	-3.0
1,080,319	-		Ga0059261_1046	0.74	-3.7
1,080,319	-		Ga0059261_1046	0.74	-3.7
1,080,320	+		Ga0059261_1046	0.74	-2.9
1,080,320	+		Ga0059261_1046	0.74	-3.6
1,080,321	-		Ga0059261_1046	0.74	-5.1
1,080,321	-		Ga0059261_1046	0.74	-4.2
1,080,321	-		Ga0059261_1046	0.74	-3.6
1,080,429	+				-4.3
1,080,532	+				-3.6
1,080,532	+				-2.0
1,080,533	-				-4.1
1,080,533	-				-2.6
1,080,533	-				-2.6
1,080,533	-				-3.3
1,080,533	-				-5.3
1,080,533	-				-2.5
1,080,968	+		Ga0059261_1047	0.68	-3.7
1,081,000	+		Ga0059261_1047	0.73	-3.4
1,081,000	+		Ga0059261_1047	0.73	-5.7
1,081,000	+		Ga0059261_1047	0.73	-3.3
1,081,000	+		Ga0059261_1047	0.73	-4.5
1,081,000	+		Ga0059261_1047	0.73	-4.0
1,081,000	+		Ga0059261_1047	0.73	-3.3
1,081,000	+		Ga0059261_1047	0.73	-3.9
1,081,001	-		Ga0059261_1047	0.73	-2.8
1,081,001	-		Ga0059261_1047	0.73	-2.9
1,081,001	-		Ga0059261_1047	0.73	-3.8
1,081,001	-		Ga0059261_1047	0.73	-4.0
1,081,139	+				-3.6
1,081,139	+				-3.9
1,081,139	+				-2.3
1,081,139	+				-3.7
1,081,139	+				+0.4
1,081,139	+				-4.8
1,081,139	+				-2.9
1,081,139	+				-2.3
1,081,139	+				-1.7
1,081,139	+				-4.1
1,081,140	-				-4.2
1,081,140	-				-2.5
1,081,140	-				-2.5
1,081,140	-				-2.9
1,081,140	-				-4.6
1,081,140	-				-3.2
1,081,140	-				-3.7
1,081,140	-				-2.1
1,081,312	+		Ga0059261_1048	0.15	-2.2
1,081,312	+		Ga0059261_1048	0.15	-1.3
1,081,312	+		Ga0059261_1048	0.15	-1.9
1,081,312	+		Ga0059261_1048	0.15	-2.0
1,081,312	+		Ga0059261_1048	0.15	-4.3
1,081,313	-		Ga0059261_1048	0.15	-4.3
1,081,313	-		Ga0059261_1048	0.15	-2.6
1,081,313	-		Ga0059261_1048	0.15	-3.2
1,081,313	-		Ga0059261_1048	0.15	-3.4
1,081,313	-		Ga0059261_1048	0.15	-3.7
1,081,313	-		Ga0059261_1048	0.15	-4.7
1,081,313	-		Ga0059261_1048	0.15	-2.8
1,081,313	-		Ga0059261_1048	0.15	-3.8
1,081,313	-		Ga0059261_1048	0.15	-5.2
1,081,619	+		Ga0059261_1048	0.55	-3.0
1,081,619	+		Ga0059261_1048	0.55	-2.3
1,081,619	+		Ga0059261_1048	0.55	-2.4
1,081,619	+		Ga0059261_1048	0.55	-2.3
1,081,619	+		Ga0059261_1048	0.55	-4.1
1,081,619	+		Ga0059261_1048	0.55	-4.6
1,081,619	+				-1.0
1,081,619	+		Ga0059261_1048	0.55	-2.0
1,081,619	+		Ga0059261_1048	0.55	-2.2
1,081,620	-		Ga0059261_1048	0.55	-2.9
1,081,620	-		Ga0059261_1048	0.55	-3.2
1,081,620	-		Ga0059261_1048	0.55	-4.9
1,081,620	-		Ga0059261_1048	0.55	-4.3
1,081,620	-		Ga0059261_1048	0.55	-2.6
1,081,620	-		Ga0059261_1048	0.55	-5.5
1,081,620	-		Ga0059261_1048	0.55	-1.7
1,081,620	-		Ga0059261_1048	0.55	-2.1
1,081,620	-		Ga0059261_1048	0.55	-1.8
1,081,620	-		Ga0059261_1048	0.55	-3.6
1,081,620	-		Ga0059261_1048	0.55	-3.6
1,081,623	+		Ga0059261_1048	0.56	-4.2
1,081,623	+		Ga0059261_1048	0.56	+0.2
1,081,623	+		Ga0059261_1048	0.56	-3.3
1,081,623	+		Ga0059261_1048	0.56	-3.5
1,081,623	+		Ga0059261_1048	0.56	-4.3
1,081,624	-		Ga0059261_1048	0.56	-1.4
1,081,624	-		Ga0059261_1048	0.56	-5.6
1,081,624	-		Ga0059261_1048	0.56	-4.0
1,081,624	-		Ga0059261_1048	0.56	-4.0
1,081,624	-		Ga0059261_1048	0.56	-4.0
1,081,744	+		Ga0059261_1048	0.71	-4.5
1,081,744	+		Ga0059261_1048	0.71	-2.6
1,081,745	-		Ga0059261_1048	0.72	-1.9
1,081,745	-		Ga0059261_1048	0.72	-2.5
1,081,745	-				-0.9
1,081,745	-		Ga0059261_1048	0.72	-4.8
1,081,966	+				-1.3
1,081,967	-				-0.4
1,081,972	+				-0.3
1,081,972	+				-1.6
1,081,973	-				+0.1
1,081,973	-				+0.5
1,081,973	-				+0.7
1,081,973	-				+0.5
1,081,995	+				+1.1
1,081,995	+				+1.2
1,082,150	+		Ga0059261_1049	0.24	+0.2
1,082,150	+		Ga0059261_1049	0.24	+0.9
1,082,151	-		Ga0059261_1049	0.25	-0.4
1,082,151	-		Ga0059261_1049	0.25	+1.7
1,082,151	-		Ga0059261_1049	0.25	+0.4
1,082,211	+		Ga0059261_1049	0.47	-2.6
1,082,211	+		Ga0059261_1049	0.47	+0.3
1,082,211	+		Ga0059261_1049	0.47	+0.7
1,082,212	-		Ga0059261_1049	0.48	-0.7
1,082,212	-		Ga0059261_1049	0.48	-1.9
1,082,212	-		Ga0059261_1049	0.48	+0.3
1,082,212	-		Ga0059261_1049	0.48	-1.6
1,082,212	-		Ga0059261_1049	0.48	+0.6
1,082,232	+		Ga0059261_1049	0.55	-1.0
1,082,347	+				+0.2
1,082,347	+				+1.0
1,082,347	+				+0.4
1,082,347	+				+1.3
1,082,348	-				+0.6
1,082,379	+				-0.4
1,082,379	+				+1.2
1,082,380	-				+0.3
1,082,380	-				-1.6
1,082,380	-				-0.1
1,082,468	+		Ga0059261_1050	0.42	+1.0
1,082,469	-		Ga0059261_1050	0.43	+1.4
1,082,469	-		Ga0059261_1050	0.43	+1.5
1,082,617	+				-2.2
1,082,617	+				-1.1
1,082,618	-				-5.0
1,082,678	+		Ga0059261_1051	0.22	-3.2
1,082,678	+		Ga0059261_1051	0.22	-2.2
1,082,678	+		Ga0059261_1051	0.22	-2.3
1,082,678	+		Ga0059261_1051	0.22	-3.2
1,082,678	+		Ga0059261_1051	0.22	-2.1
1,082,678	+		Ga0059261_1051	0.22	-2.0
1,082,678	+		Ga0059261_1051	0.22	-3.5
1,082,678	+		Ga0059261_1051	0.22	-5.3
1,082,678	+		Ga0059261_1051	0.22	-4.2
1,082,678	+		Ga0059261_1051	0.22	-3.3
1,082,679	-		Ga0059261_1051	0.23	-5.3
1,082,679	-		Ga0059261_1051	0.23	-3.4
1,082,679	-		Ga0059261_1051	0.23	-4.0
1,082,679	-		Ga0059261_1051	0.23	-3.4
1,082,679	-		Ga0059261_1051	0.23	-3.7
1,082,679	-		Ga0059261_1051	0.23	-4.4
1,082,679	-		Ga0059261_1051	0.23	-5.6
1,082,679	-		Ga0059261_1051	0.23	-3.7
1,082,679	-		Ga0059261_1051	0.23	-3.0
1,082,679	-		Ga0059261_1051	0.23	-2.5
1,082,679	-		Ga0059261_1051	0.23	-1.3
1,082,943	+				-2.7
1,082,943	+				-0.9