Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_0983

Experiment: D-Cellobiose (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C); no added vitamins
1,013,875	-		Ga0059261_0982	0.36	+0.7
1,013,875	-		Ga0059261_0982	0.36	-0.7
1,013,875	-		Ga0059261_0982	0.36	-3.2
1,013,875	-		Ga0059261_0982	0.36	-0.3
1,013,914	+		Ga0059261_0982	0.39	+1.0
1,013,914	+		Ga0059261_0982	0.39	+1.3
1,013,915	-		Ga0059261_0982	0.39	-0.1
1,013,953	+		Ga0059261_0982	0.42	+1.8
1,013,953	+		Ga0059261_0982	0.42	+0.9
1,013,953	+		Ga0059261_0982	0.42	+0.6
1,013,953	+		Ga0059261_0982	0.42	+1.1
1,013,954	-		Ga0059261_0982	0.43	+0.5
1,013,954	-		Ga0059261_0982	0.43	-1.7
1,013,954	-		Ga0059261_0982	0.43	+0.3
1,013,954	-		Ga0059261_0982	0.43	+0.9
1,013,954	-		Ga0059261_0982	0.43	+0.5
1,014,103	+		Ga0059261_0982	0.55	-1.1
1,014,103	+		Ga0059261_0982	0.55	-0.2
1,014,103	+		Ga0059261_0982	0.55	-1.0
1,014,103	+		Ga0059261_0982	0.55	+0.7
1,014,103	+		Ga0059261_0982	0.55	-1.1
1,014,103	+		Ga0059261_0982	0.55	-1.5
1,014,103	+		Ga0059261_0982	0.55	+0.8
1,014,104	-		Ga0059261_0982	0.55	-0.3
1,014,104	-		Ga0059261_0982	0.55	+1.6
1,014,104	-		Ga0059261_0982	0.55	-0.6
1,014,104	-		Ga0059261_0982	0.55	+0.9
1,014,104	-		Ga0059261_0982	0.55	+0.6
1,014,104	-		Ga0059261_0982	0.55	+0.3
1,014,104	-		Ga0059261_0982	0.55	+0.7
1,014,104	-		Ga0059261_0982	0.55	-0.7
1,014,104	-		Ga0059261_0982	0.55	-0.4
1,014,104	-		Ga0059261_0982	0.55	-2.5
1,014,104	-		Ga0059261_0982	0.55	+1.3
1,014,104	-		Ga0059261_0982	0.55	+0.7
1,014,104	-		Ga0059261_0982	0.55	+1.4
1,014,538	+				+0.2
1,014,538	+				-2.5
1,014,538	+				-0.1
1,014,538	+				-3.4
1,014,538	+				+0.6
1,014,538	+				-0.0
1,014,538	+				-2.3
1,014,539	-				+0.5
1,014,539	-				+0.7
1,014,539	-				-1.5
1,014,539	-				+0.6
1,014,645	+				+0.7
1,014,798	+				+0.6
1,014,816	+				-3.0
1,014,816	+				-1.8
1,014,817	-				+0.7
1,014,842	+				+1.0
1,014,842	+				-1.5
1,014,842	+				-3.1
1,014,842	+				-0.3
1,014,842	+				-1.2
1,014,843	-				-1.2
1,014,843	-				-0.9
1,014,843	-				-1.3
1,014,843	-				-0.6
1,015,006	+				-3.1
1,015,333	+		Ga0059261_0983	0.15	-3.6
1,015,334	-		Ga0059261_0983	0.15	-2.4
1,015,346	+		Ga0059261_0983	0.15	-0.8
1,015,347	-		Ga0059261_0983	0.15	-0.4
1,015,347	-		Ga0059261_0983	0.15	-1.5
1,015,347	-		Ga0059261_0983	0.15	-1.1
1,015,347	-		Ga0059261_0983	0.15	-0.6
1,015,347	-		Ga0059261_0983	0.15	-1.4
1,015,347	-		Ga0059261_0983	0.15	-3.5
1,015,397	+		Ga0059261_0983	0.17	+0.5
1,015,397	+		Ga0059261_0983	0.17	-0.6
1,015,397	+		Ga0059261_0983	0.17	+1.0
1,015,398	-		Ga0059261_0983	0.17	+0.5
1,015,398	-		Ga0059261_0983	0.17	-0.1
1,015,440	-		Ga0059261_0983	0.18	-2.3
1,015,460	+		Ga0059261_0983	0.19	-2.8
1,015,460	+		Ga0059261_0983	0.19	-1.8
1,015,460	+		Ga0059261_0983	0.19	-1.0
1,015,460	+		Ga0059261_0983	0.19	-2.6
1,015,460	+		Ga0059261_0983	0.19	-0.4
1,015,460	+		Ga0059261_0983	0.19	-3.7
1,015,461	-		Ga0059261_0983	0.19	+0.9
1,015,461	-		Ga0059261_0983	0.19	+2.4
1,015,461	-		Ga0059261_0983	0.19	+2.4
1,015,461	-		Ga0059261_0983	0.19	-3.8
1,015,461	-		Ga0059261_0983	0.19	-3.9
1,015,544	+		Ga0059261_0983	0.21	-1.8
1,015,544	+		Ga0059261_0983	0.21	-2.6
1,015,544	+		Ga0059261_0983	0.21	-0.4
1,015,544	+		Ga0059261_0983	0.21	+0.1
1,015,544	+		Ga0059261_0983	0.21	-2.9
1,015,545	-		Ga0059261_0983	0.21	-0.0
1,015,545	-		Ga0059261_0983	0.21	-0.5
1,015,547	+		Ga0059261_0983	0.21	-0.1
1,015,547	+		Ga0059261_0983	0.21	-1.2
1,015,548	-		Ga0059261_0983	0.21	+0.4
1,015,548	-		Ga0059261_0983	0.21	-0.7
1,015,548	-		Ga0059261_0983	0.21	-1.3
1,015,643	+		Ga0059261_0983	0.24	-1.6
1,015,644	-		Ga0059261_0983	0.24	-1.7
1,015,644	-		Ga0059261_0983	0.24	-2.0
1,015,646	+		Ga0059261_0983	0.24	-1.5
1,015,646	+		Ga0059261_0983	0.24	-0.5
1,015,646	+		Ga0059261_0983	0.24	-0.2
1,015,647	-		Ga0059261_0983	0.24	-1.9
1,015,647	-		Ga0059261_0983	0.24	-0.9
1,015,647	-		Ga0059261_0983	0.24	-0.0
1,015,647	-		Ga0059261_0983	0.24	-1.0
1,015,701	-		Ga0059261_0983	0.26	-2.2
1,015,904	+		Ga0059261_0983	0.32	-0.7
1,015,904	+		Ga0059261_0983	0.32	+0.2
1,015,904	+		Ga0059261_0983	0.32	-0.7
1,015,904	+		Ga0059261_0983	0.32	+0.6
1,015,904	+		Ga0059261_0983	0.32	-0.8
1,015,905	-		Ga0059261_0983	0.32	-3.8
1,015,905	-		Ga0059261_0983	0.32	-0.6
1,015,905	-		Ga0059261_0983	0.32	-0.1
1,015,905	-		Ga0059261_0983	0.32	-0.3
1,015,905	-		Ga0059261_0983	0.32	-1.5
1,015,905	-		Ga0059261_0983	0.32	+0.0
1,015,905	-		Ga0059261_0983	0.32	+0.0
1,015,970	+		Ga0059261_0983	0.34	-1.8
1,015,970	+		Ga0059261_0983	0.34	+0.5
1,015,971	-		Ga0059261_0983	0.34	-0.9
1,015,971	-		Ga0059261_0983	0.34	+0.5
1,015,971	-		Ga0059261_0983	0.34	-0.1
1,016,072	+		Ga0059261_0983	0.37	-0.4
1,016,072	+		Ga0059261_0983	0.37	-0.2
1,016,072	+		Ga0059261_0983	0.37	-3.4
1,016,073	-		Ga0059261_0983	0.37	-0.5
1,016,141	+				-0.9
1,016,141	+		Ga0059261_0983	0.39	-0.3
1,016,141	+		Ga0059261_0983	0.39	+0.5
1,016,142	-		Ga0059261_0983	0.40	-0.0
1,016,142	-		Ga0059261_0983	0.40	+0.2
1,016,142	-		Ga0059261_0983	0.40	+0.9
1,016,142	-		Ga0059261_0983	0.40	-0.7
1,016,142	-		Ga0059261_0983	0.40	-1.6
1,016,228	+				-1.2
1,016,228	+		Ga0059261_0983	0.42	-2.1
1,016,228	+		Ga0059261_0983	0.42	+0.7
1,016,228	+		Ga0059261_0983	0.42	-0.9
1,016,228	+		Ga0059261_0983	0.42	-0.0
1,016,228	+		Ga0059261_0983	0.42	-0.8
1,016,229	-		Ga0059261_0983	0.42	-2.9
1,016,229	-		Ga0059261_0983	0.42	+1.0
1,016,229	-		Ga0059261_0983	0.42	-0.3
1,016,229	-		Ga0059261_0983	0.42	+0.7
1,016,267	+		Ga0059261_0983	0.43	-1.2
1,016,268	-		Ga0059261_0983	0.43	-1.0
1,016,268	-		Ga0059261_0983	0.43	-1.4
1,016,333	-				-0.5
1,016,336	+		Ga0059261_0983	0.45	-0.0
1,016,336	+		Ga0059261_0983	0.45	-1.6
1,016,337	-		Ga0059261_0983	0.45	+0.5
1,016,360	+		Ga0059261_0983	0.46	-1.0
1,016,360	+		Ga0059261_0983	0.46	-1.2
1,016,361	-		Ga0059261_0983	0.46	+0.7
1,016,453	+		Ga0059261_0983	0.49	-0.9
1,016,453	+		Ga0059261_0983	0.49	-3.2
1,016,454	-		Ga0059261_0983	0.49	-0.7
1,016,472	-		Ga0059261_0983	0.50	-0.5
1,016,472	-		Ga0059261_0983	0.50	-0.5
1,016,472	-		Ga0059261_0983	0.50	-0.8
1,016,598	-		Ga0059261_0983	0.53	-0.8
1,016,598	-		Ga0059261_0983	0.53	+0.0
1,016,598	-		Ga0059261_0983	0.53	-1.9
1,016,598	-		Ga0059261_0983	0.53	-0.1
1,016,708	+		Ga0059261_0983	0.57	-0.1
1,016,708	+		Ga0059261_0983	0.57	+0.1
1,016,708	+		Ga0059261_0983	0.57	-2.1
1,016,709	-		Ga0059261_0983	0.57	+0.6
1,016,837	+		Ga0059261_0983	0.61	+1.0
1,016,859	-		Ga0059261_0983	0.61	-1.0
1,016,859	-		Ga0059261_0983	0.61	-1.9
1,016,889	-		Ga0059261_0983	0.62	-0.0
1,016,897	+		Ga0059261_0983	0.63	+0.4
1,016,897	+		Ga0059261_0983	0.63	-1.4
1,016,897	+		Ga0059261_0983	0.63	+0.7
1,016,898	-		Ga0059261_0983	0.63	-0.7
1,017,032	+		Ga0059261_0983	0.67	-0.9
1,017,032	+		Ga0059261_0983	0.67	-1.5
1,017,032	+		Ga0059261_0983	0.67	+1.2
1,017,032	+		Ga0059261_0983	0.67	+0.2
1,017,032	+		Ga0059261_0983	0.67	-1.0
1,017,033	-		Ga0059261_0983	0.67	+1.0
1,017,033	-		Ga0059261_0983	0.67	-0.8
1,017,034	+		Ga0059261_0983	0.67	+0.2
1,017,034	+		Ga0059261_0983	0.67	-1.4
1,017,035	-		Ga0059261_0983	0.67	+1.0
1,017,035	-		Ga0059261_0983	0.67	+0.4
1,017,056	+		Ga0059261_0983	0.67	-0.9
1,017,057	-		Ga0059261_0983	0.67	+0.5
1,017,062	+		Ga0059261_0983	0.68	-3.0
1,017,062	+		Ga0059261_0983	0.68	-1.0
1,017,062	+		Ga0059261_0983	0.68	+0.6
1,017,063	-		Ga0059261_0983	0.68	+0.7
1,017,116	+		Ga0059261_0983	0.69	-1.1
1,017,117	-				-1.5
1,017,117	-		Ga0059261_0983	0.69	-0.2
1,017,155	+		Ga0059261_0983	0.70	-2.5
1,017,156	-		Ga0059261_0983	0.70	-1.5
1,017,287	+		Ga0059261_0983	0.74	-2.2
1,017,288	-		Ga0059261_0983	0.74	+0.1
1,017,413	+		Ga0059261_0983	0.78	-0.3
1,017,413	+		Ga0059261_0983	0.78	-0.2
1,017,413	+		Ga0059261_0983	0.78	+0.7
1,017,414	-		Ga0059261_0983	0.78	-1.6
1,017,416	+		Ga0059261_0983	0.78	+0.6
1,017,416	+		Ga0059261_0983	0.78	+0.5
1,017,416	+		Ga0059261_0983	0.78	+0.7
1,017,416	+		Ga0059261_0983	0.78	-0.9
1,017,416	+		Ga0059261_0983	0.78	+0.1
1,017,416	+		Ga0059261_0983	0.78	-1.5
1,017,417	-		Ga0059261_0983	0.78	-0.2
1,017,417	-		Ga0059261_0983	0.78	-1.6
1,017,417	-		Ga0059261_0983	0.78	+1.1
1,017,417	-		Ga0059261_0983	0.78	+0.1
1,017,480	-		Ga0059261_0983	0.80	-1.2
1,017,584	+		Ga0059261_0983	0.83	+0.8
1,017,602	-		Ga0059261_0983	0.84	+0.0
1,017,602	-		Ga0059261_0983	0.84	+0.6
1,017,605	+		Ga0059261_0983	0.84	-0.3
1,017,605	+		Ga0059261_0983	0.84	-0.4
1,017,605	+		Ga0059261_0983	0.84	+0.9
1,017,605	+		Ga0059261_0983	0.84	-0.6
1,017,605	+		Ga0059261_0983	0.84	-0.0
1,017,605	+		Ga0059261_0983	0.84	-2.8
1,017,605	+		Ga0059261_0983	0.84	-0.9
1,017,606	-		Ga0059261_0983	0.84	+0.4
1,017,606	-		Ga0059261_0983	0.84	-0.3
1,017,606	-		Ga0059261_0983	0.84	-0.3
1,017,606	-		Ga0059261_0983	0.84	+1.0
1,017,606	-		Ga0059261_0983	0.84	-0.0
1,017,606	-		Ga0059261_0983	0.84	+0.2
1,017,634	+		Ga0059261_0983	0.85	-2.4
1,017,647	+		Ga0059261_0983	0.85	-0.9
1,017,647	+		Ga0059261_0983	0.85	-4.1
1,017,652	+		Ga0059261_0983	0.86	-1.1
1,017,652	+		Ga0059261_0983	0.86	-0.4
1,017,653	-		Ga0059261_0983	0.86	+0.4
1,017,860	+				+2.2
1,017,860	+				-0.2
1,017,861	-				+0.6
1,017,861	-				-1.0
1,017,882	-				-1.0
1,017,882	-				-2.0
1,017,882	-				+0.2
1,017,883	+				-2.7
1,017,883	+				-1.4
1,017,883	+				-2.5
1,017,883	+				-1.8
1,017,884	-				+1.5
1,017,884	-				-0.9
1,017,884	-				+1.5
1,017,921	-				-3.1
1,017,921	-				+0.8
1,017,954	-				-0.0
1,017,982	-				-0.2
1,018,016	-				+0.8
1,018,076	+				+0.1
1,018,076	+				+0.7
1,018,077	-				-1.5
1,018,077	-				-3.1
1,018,100	+				-0.4
1,018,100	+				-1.2
1,018,199	-				-0.4
1,018,199	-				+0.1
1,018,223	+				+0.6
1,018,223	+				+0.9
1,018,223	+				+1.2
1,018,224	-				-1.5
1,018,224	-				-0.5
1,018,240	+				-0.2
1,018,240	+				-0.3
1,018,241	-				+0.4
1,018,519	+		Ga0059261_0984	0.32	+0.9
1,018,519	+		Ga0059261_0984	0.32	-1.4
1,018,519	+		Ga0059261_0984	0.32	+1.3
1,018,519	+		Ga0059261_0984	0.32	+0.4
1,018,519	+		Ga0059261_0984	0.32	-1.7
1,018,519	+		Ga0059261_0984	0.32	+0.5
1,018,520	-		Ga0059261_0984	0.32	+0.0
1,018,520	-		Ga0059261_0984	0.32	+1.1
1,018,520	-		Ga0059261_0984	0.32	-2.9
1,018,520	-		Ga0059261_0984	0.32	+0.5
1,018,520	-				+0.2
1,018,520	-		Ga0059261_0984	0.32	+1.7
1,018,520	-		Ga0059261_0984	0.32	+2.5
1,018,520	-		Ga0059261_0984	0.32	-0.5
1,018,536	+		Ga0059261_0984	0.33	+1.0
1,018,536	+		Ga0059261_0984	0.33	+0.1
1,018,536	+		Ga0059261_0984	0.33	+0.7
1,018,537	-		Ga0059261_0984	0.34	+0.5
1,018,537	-		Ga0059261_0984	0.34	-2.5
1,018,537	-		Ga0059261_0984	0.34	-0.3
1,018,607	+		Ga0059261_0984	0.41	+0.8
1,018,607	+		Ga0059261_0984	0.41	+1.0
1,018,607	+		Ga0059261_0984	0.41	+0.4
1,018,607	+		Ga0059261_0984	0.41	-0.3
1,018,607	+		Ga0059261_0984	0.41	+0.6
1,018,607	+		Ga0059261_0984	0.41	-0.3
1,018,608	-		Ga0059261_0984	0.41	+0.4
1,018,608	-		Ga0059261_0984	0.41	-0.3
1,018,608	-		Ga0059261_0984	0.41	+0.7
1,018,608	-		Ga0059261_0984	0.41	+0.1
1,018,608	-		Ga0059261_0984	0.41	-0.1
1,018,608	-		Ga0059261_0984	0.41	-0.2
1,018,630	+		Ga0059261_0984	0.43	-0.3
1,018,630	+		Ga0059261_0984	0.43	+0.8
1,018,630	+		Ga0059261_0984	0.43	-0.2
1,018,631	-		Ga0059261_0984	0.43	-0.7
1,018,631	-		Ga0059261_0984	0.43	-0.6
1,018,631	-		Ga0059261_0984	0.43	-0.8
1,018,668	+		Ga0059261_0984	0.47	-0.5
1,018,680	-		Ga0059261_0984	0.48	+0.4
1,018,680	-		Ga0059261_0984	0.48	-0.0
1,018,680	-				-0.4
1,018,680	-				+2.7
1,018,709	+		Ga0059261_0984	0.51	-1.5
1,018,710	-		Ga0059261_0984	0.51	+3.1
1,018,748	+		Ga0059261_0984	0.55	-0.5
1,018,748	+		Ga0059261_0984	0.55	+0.2
1,018,748	+		Ga0059261_0984	0.55	-0.3
1,018,748	+		Ga0059261_0984	0.55	-1.1
1,018,749	-		Ga0059261_0984	0.55	-0.1
1,018,796	+		Ga0059261_0984	0.60	-1.0
1,018,797	-		Ga0059261_0984	0.60	+1.7
1,018,797	-		Ga0059261_0984	0.60	+1.6
1,018,820	+		Ga0059261_0984	0.63	+1.5
1,018,820	+		Ga0059261_0984	0.63	+0.5
1,018,820	-		Ga0059261_0984	0.63	+1.1
1,018,821	-		Ga0059261_0984	0.63	+0.1
1,018,821	-		Ga0059261_0984	0.63	+0.2
1,018,845	+		Ga0059261_0984	0.65	-0.2
1,018,846	-		Ga0059261_0984	0.65	-0.5
1,018,894	+		Ga0059261_0984	0.70	-0.7
1,018,894	+		Ga0059261_0984	0.70	+1.0
1,018,894	+		Ga0059261_0984	0.70	+2.8
1,018,895	-		Ga0059261_0984	0.70	+1.9
1,018,895	-		Ga0059261_0984	0.70	+0.4
1,018,895	-		Ga0059261_0984	0.70	-0.7
1,018,912	-		Ga0059261_0984	0.72	+0.7
1,018,940	+		Ga0059261_0984	0.75	+1.1
1,018,941	-		Ga0059261_0984	0.75	-1.4
1,018,941	-		Ga0059261_0984	0.75	-0.6
1,018,941	-		Ga0059261_0984	0.75	+1.2
1,018,941	-		Ga0059261_0984	0.75	-0.7
1,018,958	-				-1.9
1,018,958	-		Ga0059261_0984	0.77	+1.2
1,019,009	+		Ga0059261_0984	0.82	+0.4
1,019,009	+		Ga0059261_0984	0.82	+0.2
1,019,009	+		Ga0059261_0984	0.82	-0.9
1,019,009	+		Ga0059261_0984	0.82	-0.4
1,019,010	-		Ga0059261_0984	0.82	+0.1
1,019,108	+				+0.2
1,019,108	+				+2.5
1,019,109	-				+0.9
1,019,109	-				+0.2
1,019,126	+				+0.8