Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02020 and BPHYT_RS02025 are separated by 52 nucleotides BPHYT_RS02025 and BPHYT_RS02030 are separated by 122 nucleotides
BPHYT_RS02020: BPHYT_RS02020 - filamentous hemagglutinin family outer membrane protein, at 460,835 to 463,273
_RS02020
BPHYT_RS02025: BPHYT_RS02025 - peptide ABC transporter permease, at 463,326 to 465,038
_RS02025
BPHYT_RS02030: BPHYT_RS02030 - potassium channel protein, at 465,161 to 466,120
_RS02030
Position (kb) 463
464
465
466 Strain fitness (log2 ratio) -1
0
1
2 at 462.477 kb on + strand, within BPHYT_RS02020 at 462.715 kb on + strand, within BPHYT_RS02020 at 462.715 kb on + strand, within BPHYT_RS02020 at 462.889 kb on + strand at 463.017 kb on + strand, within BPHYT_RS02020 at 463.017 kb on + strand, within BPHYT_RS02020 at 463.018 kb on - strand, within BPHYT_RS02020 at 463.291 kb on + strand at 463.295 kb on + strand at 463.296 kb on - strand at 463.550 kb on - strand, within BPHYT_RS02025 at 463.551 kb on + strand, within BPHYT_RS02025 at 463.552 kb on - strand, within BPHYT_RS02025 at 463.676 kb on + strand, within BPHYT_RS02025 at 463.736 kb on - strand, within BPHYT_RS02025 at 463.773 kb on + strand, within BPHYT_RS02025 at 463.909 kb on + strand, within BPHYT_RS02025 at 463.910 kb on - strand, within BPHYT_RS02025 at 463.910 kb on - strand, within BPHYT_RS02025 at 463.910 kb on - strand, within BPHYT_RS02025 at 463.985 kb on - strand, within BPHYT_RS02025 at 464.347 kb on + strand, within BPHYT_RS02025 at 465.286 kb on - strand, within BPHYT_RS02030 at 465.433 kb on + strand, within BPHYT_RS02030 at 465.434 kb on - strand, within BPHYT_RS02030 at 465.536 kb on - strand, within BPHYT_RS02030 at 465.759 kb on + strand, within BPHYT_RS02030 at 465.760 kb on - strand, within BPHYT_RS02030 at 465.880 kb on - strand, within BPHYT_RS02030 at 465.880 kb on - strand, within BPHYT_RS02030 at 465.969 kb on + strand, within BPHYT_RS02030 at 465.969 kb on + strand, within BPHYT_RS02030 at 465.970 kb on - strand, within BPHYT_RS02030
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 462,477 + BPHYT_RS02020 0.67 +0.9 462,715 + BPHYT_RS02020 0.77 +0.1 462,715 + BPHYT_RS02020 0.77 -0.1 462,889 + -0.1 463,017 + BPHYT_RS02020 0.89 +0.2 463,017 + BPHYT_RS02020 0.89 -0.1 463,018 - BPHYT_RS02020 0.90 +0.0 463,291 + -0.3 463,295 + -0.4 463,296 - +1.3 463,550 - BPHYT_RS02025 0.13 +0.3 463,551 + BPHYT_RS02025 0.13 +0.5 463,552 - BPHYT_RS02025 0.13 +0.9 463,676 + BPHYT_RS02025 0.20 +0.3 463,736 - BPHYT_RS02025 0.24 +1.9 463,773 + BPHYT_RS02025 0.26 +0.5 463,909 + BPHYT_RS02025 0.34 -0.5 463,910 - BPHYT_RS02025 0.34 +0.3 463,910 - BPHYT_RS02025 0.34 +0.4 463,910 - BPHYT_RS02025 0.34 +1.3 463,985 - BPHYT_RS02025 0.38 -0.1 464,347 + BPHYT_RS02025 0.60 +0.0 465,286 - BPHYT_RS02030 0.13 -0.6 465,433 + BPHYT_RS02030 0.28 +0.9 465,434 - BPHYT_RS02030 0.28 +0.3 465,536 - BPHYT_RS02030 0.39 +1.3 465,759 + BPHYT_RS02030 0.62 -1.1 465,760 - BPHYT_RS02030 0.62 +0.5 465,880 - BPHYT_RS02030 0.75 -0.4 465,880 - BPHYT_RS02030 0.75 -0.0 465,969 + BPHYT_RS02030 0.84 -0.8 465,969 + BPHYT_RS02030 0.84 -0.1 465,970 - BPHYT_RS02030 0.84 -0.3
Or see this region's nucleotide sequence