Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16655 and AZOBR_RS16660 are separated by 126 nucleotides AZOBR_RS16660 and AZOBR_RS16665 are separated by 58 nucleotides AZOBR_RS16665 and AZOBR_RS16670 overlap by 8 nucleotides
AZOBR_RS16655: AZOBR_RS16655 - ABC transporter permease, at 493,633 to 494,520
_RS16655
AZOBR_RS16660: AZOBR_RS16660 - ABC transporter permease, at 494,647 to 495,849
_RS16660
AZOBR_RS16665: AZOBR_RS16665 - histidinol dehydrogenase, at 495,908 to 496,630
_RS16665
AZOBR_RS16670: AZOBR_RS16670 - amino acid ABC transporter ATP-binding protein, at 496,623 to 497,399
_RS16670
Position (kb) 494
495
496 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 493.862 kb on + strand, within AZOBR_RS16655 at 493.862 kb on + strand, within AZOBR_RS16655 at 493.916 kb on + strand, within AZOBR_RS16655 at 493.994 kb on + strand, within AZOBR_RS16655 at 493.994 kb on + strand, within AZOBR_RS16655 at 494.076 kb on - strand, within AZOBR_RS16655 at 494.156 kb on + strand, within AZOBR_RS16655 at 494.157 kb on - strand, within AZOBR_RS16655 at 494.157 kb on - strand, within AZOBR_RS16655 at 494.157 kb on - strand, within AZOBR_RS16655 at 494.197 kb on + strand, within AZOBR_RS16655 at 494.216 kb on + strand, within AZOBR_RS16655 at 494.217 kb on - strand, within AZOBR_RS16655 at 494.217 kb on - strand, within AZOBR_RS16655 at 494.235 kb on - strand, within AZOBR_RS16655 at 494.235 kb on - strand, within AZOBR_RS16655 at 494.235 kb on - strand, within AZOBR_RS16655 at 494.370 kb on - strand, within AZOBR_RS16655 at 494.370 kb on - strand, within AZOBR_RS16655 at 494.370 kb on - strand, within AZOBR_RS16655 at 494.538 kb on + strand at 494.648 kb on + strand at 494.648 kb on + strand at 494.648 kb on + strand at 494.648 kb on + strand at 494.649 kb on - strand at 494.649 kb on - strand at 494.724 kb on - strand at 494.774 kb on + strand, within AZOBR_RS16660 at 494.774 kb on + strand, within AZOBR_RS16660 at 494.774 kb on + strand, within AZOBR_RS16660 at 494.774 kb on + strand, within AZOBR_RS16660 at 494.774 kb on + strand, within AZOBR_RS16660 at 494.774 kb on + strand, within AZOBR_RS16660 at 494.774 kb on + strand, within AZOBR_RS16660 at 494.774 kb on + strand, within AZOBR_RS16660 at 494.774 kb on + strand, within AZOBR_RS16660 at 494.775 kb on - strand, within AZOBR_RS16660 at 494.775 kb on - strand, within AZOBR_RS16660 at 494.775 kb on - strand, within AZOBR_RS16660 at 494.775 kb on - strand, within AZOBR_RS16660 at 494.775 kb on - strand, within AZOBR_RS16660 at 494.775 kb on - strand, within AZOBR_RS16660 at 494.775 kb on - strand, within AZOBR_RS16660 at 494.775 kb on - strand, within AZOBR_RS16660 at 494.775 kb on - strand, within AZOBR_RS16660 at 494.927 kb on + strand, within AZOBR_RS16660 at 494.927 kb on + strand, within AZOBR_RS16660 at 495.222 kb on - strand, within AZOBR_RS16660 at 495.222 kb on - strand, within AZOBR_RS16660 at 495.350 kb on + strand, within AZOBR_RS16660 at 495.350 kb on + strand, within AZOBR_RS16660 at 495.407 kb on + strand, within AZOBR_RS16660 at 495.408 kb on - strand, within AZOBR_RS16660 at 495.408 kb on - strand, within AZOBR_RS16660 at 495.416 kb on + strand, within AZOBR_RS16660 at 495.416 kb on + strand, within AZOBR_RS16660 at 495.417 kb on - strand, within AZOBR_RS16660 at 495.731 kb on + strand at 495.731 kb on + strand at 495.731 kb on + strand at 495.732 kb on - strand at 495.732 kb on - strand at 495.922 kb on - strand at 495.922 kb on - strand at 495.922 kb on - strand at 495.922 kb on - strand at 495.922 kb on - strand at 495.922 kb on - strand at 495.922 kb on - strand at 495.999 kb on + strand, within AZOBR_RS16665 at 495.999 kb on + strand, within AZOBR_RS16665 at 496.260 kb on + strand, within AZOBR_RS16665 at 496.261 kb on - strand, within AZOBR_RS16665
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 493,862 + AZOBR_RS16655 0.26 +2.3 493,862 + AZOBR_RS16655 0.26 -1.6 493,916 + AZOBR_RS16655 0.32 -1.7 493,994 + AZOBR_RS16655 0.41 +0.0 493,994 + AZOBR_RS16655 0.41 -0.3 494,076 - AZOBR_RS16655 0.50 +0.9 494,156 + AZOBR_RS16655 0.59 -2.8 494,157 - AZOBR_RS16655 0.59 -2.2 494,157 - AZOBR_RS16655 0.59 -0.2 494,157 - AZOBR_RS16655 0.59 -0.4 494,197 + AZOBR_RS16655 0.64 -0.1 494,216 + AZOBR_RS16655 0.66 +0.7 494,217 - AZOBR_RS16655 0.66 +0.8 494,217 - AZOBR_RS16655 0.66 +0.5 494,235 - AZOBR_RS16655 0.68 -0.6 494,235 - AZOBR_RS16655 0.68 -0.9 494,235 - AZOBR_RS16655 0.68 +0.2 494,370 - AZOBR_RS16655 0.83 +1.5 494,370 - AZOBR_RS16655 0.83 -2.0 494,370 - AZOBR_RS16655 0.83 -0.5 494,538 + -0.9 494,648 + +2.3 494,648 + +0.3 494,648 + -0.6 494,648 + -0.0 494,649 - +0.8 494,649 - +1.5 494,724 - +1.0 494,774 + AZOBR_RS16660 0.11 -1.6 494,774 + AZOBR_RS16660 0.11 -0.0 494,774 + AZOBR_RS16660 0.11 -0.9 494,774 + AZOBR_RS16660 0.11 +0.8 494,774 + AZOBR_RS16660 0.11 -0.6 494,774 + AZOBR_RS16660 0.11 -0.3 494,774 + AZOBR_RS16660 0.11 -3.0 494,774 + AZOBR_RS16660 0.11 -0.8 494,774 + AZOBR_RS16660 0.11 +0.3 494,775 - AZOBR_RS16660 0.11 -0.7 494,775 - AZOBR_RS16660 0.11 +0.2 494,775 - AZOBR_RS16660 0.11 -0.3 494,775 - AZOBR_RS16660 0.11 -2.0 494,775 - AZOBR_RS16660 0.11 +0.1 494,775 - AZOBR_RS16660 0.11 +1.4 494,775 - AZOBR_RS16660 0.11 -1.4 494,775 - AZOBR_RS16660 0.11 -1.5 494,775 - AZOBR_RS16660 0.11 -1.1 494,927 + AZOBR_RS16660 0.23 +0.6 494,927 + AZOBR_RS16660 0.23 -2.7 495,222 - AZOBR_RS16660 0.48 -0.4 495,222 - AZOBR_RS16660 0.48 -0.0 495,350 + AZOBR_RS16660 0.58 +0.0 495,350 + AZOBR_RS16660 0.58 +1.7 495,407 + AZOBR_RS16660 0.63 +0.0 495,408 - AZOBR_RS16660 0.63 -0.9 495,408 - AZOBR_RS16660 0.63 +0.3 495,416 + AZOBR_RS16660 0.64 -0.9 495,416 + AZOBR_RS16660 0.64 -2.9 495,417 - AZOBR_RS16660 0.64 +0.1 495,731 + -0.0 495,731 + +1.6 495,731 + +0.3 495,732 - -1.7 495,732 - +2.3 495,922 - -0.5 495,922 - +0.1 495,922 - +0.7 495,922 - +0.4 495,922 - -0.4 495,922 - +0.7 495,922 - -2.7 495,999 + AZOBR_RS16665 0.13 -0.9 495,999 + AZOBR_RS16665 0.13 -0.7 496,260 + AZOBR_RS16665 0.49 +1.0 496,261 - AZOBR_RS16665 0.49 +1.2
Or see this region's nucleotide sequence