Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01585 and AZOBR_RS01590 are separated by 158 nucleotides AZOBR_RS01590 and AZOBR_RS01595 overlap by 8 nucleotides AZOBR_RS01595 and AZOBR_RS01600 are separated by 3 nucleotides
AZOBR_RS01585: AZOBR_RS01585 - zinc transporter, at 325,058 to 326,044
_RS01585
AZOBR_RS01590: AZOBR_RS01590 - zinc ABC transporter ATP-binding protein, at 326,203 to 326,964
_RS01590
AZOBR_RS01595: AZOBR_RS01595 - zinc transporter, at 326,957 to 327,745
_RS01595
AZOBR_RS01600: AZOBR_RS01600 - LysR family transcriptional regulator, at 327,749 to 328,633
_RS01600
Position (kb) 326
327 Strain fitness (log2 ratio) -2
-1
0
1 at 325.339 kb on - strand, within AZOBR_RS01585 at 325.353 kb on + strand, within AZOBR_RS01585 at 325.359 kb on + strand, within AZOBR_RS01585 at 325.360 kb on - strand, within AZOBR_RS01585 at 325.470 kb on + strand, within AZOBR_RS01585 at 325.618 kb on + strand, within AZOBR_RS01585 at 325.618 kb on + strand, within AZOBR_RS01585 at 325.619 kb on - strand, within AZOBR_RS01585 at 325.619 kb on - strand, within AZOBR_RS01585 at 325.619 kb on - strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.845 kb on + strand, within AZOBR_RS01585 at 325.846 kb on - strand, within AZOBR_RS01585 at 325.846 kb on - strand, within AZOBR_RS01585 at 326.093 kb on + strand at 326.093 kb on + strand at 326.093 kb on + strand at 326.093 kb on + strand at 326.093 kb on + strand at 326.093 kb on + strand at 326.094 kb on - strand at 326.094 kb on - strand at 326.094 kb on - strand at 326.094 kb on - strand at 326.094 kb on - strand at 326.417 kb on - strand, within AZOBR_RS01590 at 326.417 kb on - strand, within AZOBR_RS01590 at 326.884 kb on + strand, within AZOBR_RS01590 at 326.884 kb on + strand, within AZOBR_RS01590 at 326.885 kb on - strand, within AZOBR_RS01590 at 326.885 kb on - strand, within AZOBR_RS01590 at 326.885 kb on - strand, within AZOBR_RS01590 at 326.885 kb on - strand, within AZOBR_RS01590 at 327.053 kb on + strand, within AZOBR_RS01595 at 327.054 kb on - strand, within AZOBR_RS01595 at 327.296 kb on + strand, within AZOBR_RS01595 at 327.347 kb on + strand, within AZOBR_RS01595 at 327.348 kb on - strand, within AZOBR_RS01595 at 327.348 kb on - strand, within AZOBR_RS01595
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 325,339 - AZOBR_RS01585 0.28 -0.3 325,353 + AZOBR_RS01585 0.30 -1.3 325,359 + AZOBR_RS01585 0.30 +1.4 325,360 - AZOBR_RS01585 0.31 -1.5 325,470 + AZOBR_RS01585 0.42 -0.8 325,618 + AZOBR_RS01585 0.57 -0.6 325,618 + AZOBR_RS01585 0.57 -1.6 325,619 - AZOBR_RS01585 0.57 +0.4 325,619 - AZOBR_RS01585 0.57 -1.8 325,619 - AZOBR_RS01585 0.57 -0.7 325,845 + AZOBR_RS01585 0.80 -1.0 325,845 + AZOBR_RS01585 0.80 -1.9 325,845 + AZOBR_RS01585 0.80 -1.4 325,845 + AZOBR_RS01585 0.80 -1.3 325,845 + AZOBR_RS01585 0.80 -0.9 325,846 - AZOBR_RS01585 0.80 -2.6 325,846 - AZOBR_RS01585 0.80 -2.1 326,093 + -0.4 326,093 + -0.9 326,093 + +0.9 326,093 + -1.0 326,093 + -0.2 326,093 + -1.4 326,094 - +0.4 326,094 - +0.9 326,094 - -2.5 326,094 - -0.4 326,094 - +0.2 326,417 - AZOBR_RS01590 0.28 +0.8 326,417 - AZOBR_RS01590 0.28 -1.6 326,884 + AZOBR_RS01590 0.89 -0.7 326,884 + AZOBR_RS01590 0.89 -1.9 326,885 - AZOBR_RS01590 0.90 +0.4 326,885 - AZOBR_RS01590 0.90 -1.5 326,885 - AZOBR_RS01590 0.90 -0.2 326,885 - AZOBR_RS01590 0.90 -1.0 327,053 + AZOBR_RS01595 0.12 -0.2 327,054 - AZOBR_RS01595 0.12 -1.7 327,296 + AZOBR_RS01595 0.43 -0.1 327,347 + AZOBR_RS01595 0.49 -2.3 327,348 - AZOBR_RS01595 0.50 -0.2 327,348 - AZOBR_RS01595 0.50 -2.0
Or see this region's nucleotide sequence