Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18165 and AO356_18170 are separated by 238 nucleotides AO356_18170 and AO356_18175 are separated by 10 nucleotides AO356_18175 and AO356_18180 are separated by 467 nucleotides
AO356_18165: AO356_18165 - serine dehydratase, at 4,092,480 to 4,093,856
_18165
AO356_18170: AO356_18170 - glycine dehydrogenase, at 4,094,095 to 4,096,944
_18170
AO356_18175: AO356_18175 - glycine cleavage system protein H, at 4,096,955 to 4,097,338
_18175
AO356_18180: AO356_18180 - Fis family transcriptional regulator, at 4,097,806 to 4,099,314
_18180
Position (kb)
4094
4095
4096
4097 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4093.297 kb on + strand, within AO356_18165 at 4093.297 kb on + strand, within AO356_18165 at 4093.298 kb on - strand, within AO356_18165 at 4093.298 kb on - strand, within AO356_18165 at 4093.298 kb on - strand, within AO356_18165 at 4093.298 kb on - strand, within AO356_18165 at 4093.298 kb on - strand, within AO356_18165 at 4093.423 kb on + strand, within AO356_18165 at 4093.423 kb on + strand, within AO356_18165 at 4093.423 kb on + strand, within AO356_18165 at 4093.424 kb on - strand, within AO356_18165 at 4093.424 kb on - strand, within AO356_18165 at 4093.426 kb on + strand, within AO356_18165 at 4093.426 kb on + strand, within AO356_18165 at 4093.426 kb on + strand, within AO356_18165 at 4093.705 kb on + strand, within AO356_18165 at 4093.878 kb on + strand at 4093.878 kb on + strand at 4093.879 kb on - strand at 4093.879 kb on - strand at 4094.091 kb on + strand at 4094.091 kb on + strand at 4094.091 kb on + strand at 4094.091 kb on + strand at 4094.091 kb on + strand at 4094.092 kb on - strand at 4094.102 kb on + strand at 4094.102 kb on + strand at 4094.102 kb on + strand at 4094.102 kb on + strand at 4094.102 kb on + strand at 4094.102 kb on + strand at 4094.102 kb on + strand at 4094.103 kb on - strand at 4094.103 kb on - strand at 4094.103 kb on - strand at 4094.103 kb on - strand at 4094.180 kb on + strand at 4094.180 kb on + strand at 4094.181 kb on - strand at 4094.181 kb on - strand at 4094.181 kb on - strand at 4094.232 kb on - strand at 4094.232 kb on - strand at 4094.576 kb on + strand, within AO356_18170 at 4094.603 kb on + strand, within AO356_18170 at 4094.603 kb on + strand, within AO356_18170 at 4094.603 kb on + strand, within AO356_18170 at 4094.603 kb on + strand, within AO356_18170 at 4094.603 kb on + strand, within AO356_18170 at 4094.603 kb on + strand, within AO356_18170 at 4094.603 kb on + strand, within AO356_18170 at 4094.604 kb on - strand, within AO356_18170 at 4094.604 kb on - strand, within AO356_18170 at 4094.604 kb on - strand, within AO356_18170 at 4094.604 kb on - strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.669 kb on + strand, within AO356_18170 at 4094.670 kb on - strand, within AO356_18170 at 4094.670 kb on - strand, within AO356_18170 at 4094.670 kb on - strand, within AO356_18170 at 4094.670 kb on - strand, within AO356_18170 at 4094.924 kb on + strand, within AO356_18170 at 4094.924 kb on + strand, within AO356_18170 at 4094.924 kb on + strand, within AO356_18170 at 4094.924 kb on + strand, within AO356_18170 at 4094.924 kb on + strand, within AO356_18170 at 4094.924 kb on + strand, within AO356_18170 at 4094.925 kb on - strand, within AO356_18170 at 4094.925 kb on - strand, within AO356_18170 at 4094.925 kb on - strand, within AO356_18170 at 4094.984 kb on - strand, within AO356_18170 at 4094.984 kb on - strand, within AO356_18170 at 4094.984 kb on - strand, within AO356_18170 at 4095.002 kb on + strand, within AO356_18170 at 4095.003 kb on - strand, within AO356_18170 at 4095.003 kb on - strand, within AO356_18170 at 4095.203 kb on + strand, within AO356_18170 at 4095.230 kb on + strand, within AO356_18170 at 4095.276 kb on - strand, within AO356_18170 at 4095.902 kb on + strand, within AO356_18170 at 4095.911 kb on + strand, within AO356_18170 at 4095.911 kb on + strand, within AO356_18170 at 4095.911 kb on + strand, within AO356_18170 at 4095.911 kb on + strand, within AO356_18170 at 4095.911 kb on + strand, within AO356_18170 at 4095.912 kb on - strand, within AO356_18170 at 4095.912 kb on - strand, within AO356_18170 at 4095.912 kb on - strand, within AO356_18170 at 4096.097 kb on + strand, within AO356_18170 at 4096.097 kb on + strand, within AO356_18170 at 4096.098 kb on - strand, within AO356_18170 at 4096.098 kb on - strand, within AO356_18170 at 4096.098 kb on - strand, within AO356_18170 at 4096.098 kb on - strand, within AO356_18170 at 4096.098 kb on - strand, within AO356_18170 at 4096.098 kb on - strand, within AO356_18170 at 4096.393 kb on + strand, within AO356_18170 at 4096.393 kb on + strand, within AO356_18170 at 4096.393 kb on + strand, within AO356_18170 at 4096.611 kb on - strand, within AO356_18170 at 4096.611 kb on - strand, within AO356_18170 at 4096.619 kb on + strand, within AO356_18170 at 4096.620 kb on - strand, within AO356_18170 at 4096.620 kb on - strand, within AO356_18170 at 4096.620 kb on - strand, within AO356_18170 at 4096.620 kb on - strand, within AO356_18170 at 4096.628 kb on + strand, within AO356_18170 at 4096.629 kb on - strand, within AO356_18170 at 4096.685 kb on + strand at 4096.685 kb on + strand at 4096.685 kb on + strand at 4096.685 kb on + strand at 4096.685 kb on + strand at 4096.685 kb on + strand at 4096.685 kb on + strand at 4096.685 kb on + strand at 4096.685 kb on + strand at 4096.685 kb on + strand at 4096.686 kb on - strand at 4096.686 kb on - strand at 4096.686 kb on - strand at 4096.686 kb on - strand at 4096.686 kb on - strand at 4096.686 kb on - strand at 4096.688 kb on + strand at 4096.688 kb on + strand at 4096.703 kb on + strand at 4096.703 kb on + strand at 4096.703 kb on + strand at 4096.703 kb on + strand at 4096.703 kb on + strand at 4096.704 kb on - strand at 4096.704 kb on - strand at 4096.704 kb on - strand at 4096.704 kb on - strand at 4096.704 kb on - strand at 4096.989 kb on + strand at 4096.989 kb on + strand at 4096.989 kb on + strand at 4096.990 kb on - strand at 4097.011 kb on + strand, within AO356_18175 at 4097.038 kb on + strand, within AO356_18175 at 4097.039 kb on - strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.142 kb on + strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.143 kb on - strand, within AO356_18175 at 4097.199 kb on + strand, within AO356_18175 at 4097.199 kb on + strand, within AO356_18175 at 4097.199 kb on + strand, within AO356_18175 at 4097.270 kb on + strand, within AO356_18175 at 4097.270 kb on + strand, within AO356_18175 at 4097.271 kb on - strand, within AO356_18175 at 4097.410 kb on - strand at 4097.410 kb on - strand at 4097.410 kb on - strand at 4097.410 kb on - strand at 4097.410 kb on - strand at 4097.411 kb on + strand at 4097.411 kb on + strand at 4097.439 kb on - strand at 4097.441 kb on + strand at 4097.454 kb on - strand at 4097.454 kb on - strand at 4097.612 kb on + strand at 4097.900 kb on + strand at 4097.901 kb on - strand at 4097.901 kb on - strand at 4097.910 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 4,093,297 + AO356_18165 0.59 +0.5 4,093,297 + AO356_18165 0.59 -0.0 4,093,298 - AO356_18165 0.59 -0.6 4,093,298 - AO356_18165 0.59 +0.5 4,093,298 - AO356_18165 0.59 +0.2 4,093,298 - AO356_18165 0.59 -1.3 4,093,298 - AO356_18165 0.59 +0.4 4,093,423 + AO356_18165 0.68 -0.4 4,093,423 + AO356_18165 0.68 +0.6 4,093,423 + AO356_18165 0.68 +0.2 4,093,424 - AO356_18165 0.69 -0.2 4,093,424 - AO356_18165 0.69 -0.2 4,093,426 + AO356_18165 0.69 -0.8 4,093,426 + AO356_18165 0.69 -0.2 4,093,426 + AO356_18165 0.69 -1.1 4,093,705 + AO356_18165 0.89 +0.8 4,093,878 + -0.4 4,093,878 + -1.8 4,093,879 - +0.1 4,093,879 - +0.2 4,094,091 + -0.3 4,094,091 + -0.5 4,094,091 + -0.3 4,094,091 + -0.5 4,094,091 + +0.6 4,094,092 - -1.4 4,094,102 + -0.1 4,094,102 + +0.2 4,094,102 + +1.0 4,094,102 + +0.6 4,094,102 + +0.3 4,094,102 + -0.2 4,094,102 + +0.4 4,094,103 - -1.0 4,094,103 - -0.7 4,094,103 - -0.3 4,094,103 - -0.0 4,094,180 + -0.3 4,094,180 + +0.9 4,094,181 - +0.1 4,094,181 - -0.2 4,094,181 - -1.3 4,094,232 - -1.6 4,094,232 - -0.8 4,094,576 + AO356_18170 0.17 +0.7 4,094,603 + AO356_18170 0.18 +0.9 4,094,603 + AO356_18170 0.18 -0.4 4,094,603 + AO356_18170 0.18 -0.3 4,094,603 + AO356_18170 0.18 -0.1 4,094,603 + AO356_18170 0.18 +1.8 4,094,603 + AO356_18170 0.18 +0.2 4,094,603 + AO356_18170 0.18 -0.2 4,094,604 - AO356_18170 0.18 +0.6 4,094,604 - AO356_18170 0.18 -0.3 4,094,604 - AO356_18170 0.18 +1.3 4,094,604 - AO356_18170 0.18 -1.4 4,094,669 + AO356_18170 0.20 -0.2 4,094,669 + AO356_18170 0.20 +0.2 4,094,669 + AO356_18170 0.20 +0.3 4,094,669 + AO356_18170 0.20 +0.6 4,094,669 + AO356_18170 0.20 +0.2 4,094,669 + AO356_18170 0.20 +0.4 4,094,669 + AO356_18170 0.20 +0.4 4,094,669 + AO356_18170 0.20 -0.5 4,094,669 + AO356_18170 0.20 -0.9 4,094,669 + AO356_18170 0.20 -0.1 4,094,669 + AO356_18170 0.20 +0.6 4,094,669 + AO356_18170 0.20 -0.1 4,094,670 - AO356_18170 0.20 -0.7 4,094,670 - AO356_18170 0.20 +0.2 4,094,670 - AO356_18170 0.20 -0.6 4,094,670 - AO356_18170 0.20 -1.8 4,094,924 + AO356_18170 0.29 -0.2 4,094,924 + AO356_18170 0.29 -1.5 4,094,924 + AO356_18170 0.29 +0.2 4,094,924 + AO356_18170 0.29 -0.1 4,094,924 + AO356_18170 0.29 -0.2 4,094,924 + AO356_18170 0.29 +1.5 4,094,925 - AO356_18170 0.29 +0.3 4,094,925 - AO356_18170 0.29 -0.1 4,094,925 - AO356_18170 0.29 +0.2 4,094,984 - AO356_18170 0.31 -0.5 4,094,984 - AO356_18170 0.31 +0.6 4,094,984 - AO356_18170 0.31 -0.2 4,095,002 + AO356_18170 0.32 -0.8 4,095,003 - AO356_18170 0.32 -2.0 4,095,003 - AO356_18170 0.32 -0.1 4,095,203 + AO356_18170 0.39 -0.3 4,095,230 + AO356_18170 0.40 -0.3 4,095,276 - AO356_18170 0.41 +0.3 4,095,902 + AO356_18170 0.63 -0.1 4,095,911 + AO356_18170 0.64 +0.2 4,095,911 + AO356_18170 0.64 +0.6 4,095,911 + AO356_18170 0.64 -0.2 4,095,911 + AO356_18170 0.64 -2.0 4,095,911 + AO356_18170 0.64 +0.9 4,095,912 - AO356_18170 0.64 +0.7 4,095,912 - AO356_18170 0.64 +0.5 4,095,912 - AO356_18170 0.64 -0.2 4,096,097 + AO356_18170 0.70 +1.2 4,096,097 + AO356_18170 0.70 -0.1 4,096,098 - AO356_18170 0.70 +0.3 4,096,098 - AO356_18170 0.70 -0.3 4,096,098 - AO356_18170 0.70 -0.8 4,096,098 - AO356_18170 0.70 -0.8 4,096,098 - AO356_18170 0.70 +0.6 4,096,098 - AO356_18170 0.70 +0.8 4,096,393 + AO356_18170 0.81 +0.1 4,096,393 + AO356_18170 0.81 -0.1 4,096,393 + AO356_18170 0.81 +0.2 4,096,611 - AO356_18170 0.88 +0.2 4,096,611 - AO356_18170 0.88 +1.4 4,096,619 + AO356_18170 0.89 -1.5 4,096,620 - AO356_18170 0.89 -0.2 4,096,620 - AO356_18170 0.89 -2.3 4,096,620 - AO356_18170 0.89 -0.2 4,096,620 - AO356_18170 0.89 +1.0 4,096,628 + AO356_18170 0.89 +0.3 4,096,629 - AO356_18170 0.89 -0.8 4,096,685 + -1.4 4,096,685 + +1.2 4,096,685 + +0.8 4,096,685 + +0.6 4,096,685 + -2.0 4,096,685 + -0.2 4,096,685 + +0.8 4,096,685 + +0.8 4,096,685 + +0.4 4,096,685 + -0.3 4,096,686 - -0.3 4,096,686 - +0.1 4,096,686 - +0.5 4,096,686 - +0.0 4,096,686 - +0.5 4,096,686 - -1.7 4,096,688 + -0.1 4,096,688 + +0.3 4,096,703 + -0.6 4,096,703 + +0.2 4,096,703 + +0.5 4,096,703 + +1.1 4,096,703 + -1.1 4,096,704 - +0.5 4,096,704 - +0.3 4,096,704 - -0.6 4,096,704 - -0.5 4,096,704 - -0.2 4,096,989 + -0.3 4,096,989 + +0.7 4,096,989 + -0.4 4,096,990 - -0.7 4,097,011 + AO356_18175 0.15 +0.5 4,097,038 + AO356_18175 0.22 +0.4 4,097,039 - AO356_18175 0.22 +0.6 4,097,142 + AO356_18175 0.49 -0.5 4,097,142 + AO356_18175 0.49 +0.1 4,097,142 + AO356_18175 0.49 -0.3 4,097,142 + AO356_18175 0.49 +0.1 4,097,142 + AO356_18175 0.49 +1.0 4,097,142 + AO356_18175 0.49 +0.5 4,097,142 + AO356_18175 0.49 -1.1 4,097,142 + AO356_18175 0.49 -0.6 4,097,142 + AO356_18175 0.49 -0.3 4,097,142 + AO356_18175 0.49 -0.1 4,097,142 + AO356_18175 0.49 +0.8 4,097,142 + AO356_18175 0.49 -0.1 4,097,143 - AO356_18175 0.49 +0.1 4,097,143 - AO356_18175 0.49 +0.1 4,097,143 - AO356_18175 0.49 +0.5 4,097,143 - AO356_18175 0.49 +0.1 4,097,143 - AO356_18175 0.49 +0.6 4,097,143 - AO356_18175 0.49 +0.3 4,097,143 - AO356_18175 0.49 +0.3 4,097,143 - AO356_18175 0.49 -0.2 4,097,143 - AO356_18175 0.49 -1.0 4,097,143 - AO356_18175 0.49 +0.1 4,097,199 + AO356_18175 0.64 +0.1 4,097,199 + AO356_18175 0.64 +0.1 4,097,199 + AO356_18175 0.64 +0.7 4,097,270 + AO356_18175 0.82 -0.1 4,097,270 + AO356_18175 0.82 -0.4 4,097,271 - AO356_18175 0.82 +0.1 4,097,410 - +1.3 4,097,410 - -0.8 4,097,410 - -0.5 4,097,410 - -1.0 4,097,410 - +0.6 4,097,411 + -0.3 4,097,411 + +0.0 4,097,439 - -0.3 4,097,441 + +0.4 4,097,454 - +0.1 4,097,454 - +0.4 4,097,612 + -0.2 4,097,900 + +0.9 4,097,901 - +1.3 4,097,901 - +1.2 4,097,910 - +0.0
Or see this region's nucleotide sequence