Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14055 and AO356_14060 are separated by 206 nucleotides AO356_14060 and AO356_14065 overlap by 4 nucleotides
AO356_14055: AO356_14055 - hexuronate transporter, at 3,189,748 to 3,191,046
_14055
AO356_14060: AO356_14060 - hypothetical protein, at 3,191,253 to 3,191,432
_14060
AO356_14065: AO356_14065 - peptidase, at 3,191,429 to 3,192,559
_14065
Position (kb)
3191
3192 Strain fitness (log2 ratio)
-2
-1
0
1 at 3190.292 kb on + strand, within AO356_14055 at 3190.292 kb on + strand, within AO356_14055 at 3190.292 kb on + strand, within AO356_14055 at 3190.361 kb on + strand, within AO356_14055 at 3190.361 kb on + strand, within AO356_14055 at 3190.448 kb on + strand, within AO356_14055 at 3190.448 kb on + strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.449 kb on - strand, within AO356_14055 at 3190.496 kb on + strand, within AO356_14055 at 3190.497 kb on - strand, within AO356_14055 at 3190.497 kb on - strand, within AO356_14055 at 3190.850 kb on + strand, within AO356_14055 at 3190.850 kb on + strand, within AO356_14055 at 3190.851 kb on - strand, within AO356_14055 at 3190.851 kb on - strand, within AO356_14055 at 3190.878 kb on - strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.910 kb on + strand, within AO356_14055 at 3190.911 kb on - strand, within AO356_14055 at 3190.926 kb on + strand at 3190.926 kb on + strand at 3190.926 kb on + strand at 3190.927 kb on - strand at 3190.927 kb on - strand at 3190.927 kb on - strand at 3190.969 kb on - strand at 3190.969 kb on - strand at 3190.982 kb on + strand at 3190.983 kb on - strand at 3191.120 kb on - strand at 3191.120 kb on - strand at 3191.120 kb on - strand at 3191.121 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.151 kb on + strand at 3191.152 kb on - strand at 3191.152 kb on - strand at 3191.152 kb on - strand at 3191.201 kb on + strand at 3191.201 kb on + strand at 3191.202 kb on - strand at 3191.295 kb on + strand, within AO356_14060 at 3191.295 kb on + strand, within AO356_14060 at 3191.296 kb on - strand, within AO356_14060 at 3191.296 kb on - strand, within AO356_14060 at 3191.484 kb on - strand at 3191.493 kb on + strand at 3191.494 kb on - strand at 3191.568 kb on + strand, within AO356_14065 at 3191.568 kb on + strand, within AO356_14065 at 3191.569 kb on - strand, within AO356_14065 at 3191.588 kb on + strand, within AO356_14065 at 3191.613 kb on + strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.614 kb on - strand, within AO356_14065 at 3191.767 kb on + strand, within AO356_14065 at 3191.767 kb on + strand, within AO356_14065 at 3191.767 kb on + strand, within AO356_14065 at 3191.768 kb on - strand, within AO356_14065 at 3191.768 kb on - strand, within AO356_14065 at 3192.060 kb on + strand, within AO356_14065 at 3192.061 kb on - strand, within AO356_14065 at 3192.061 kb on - strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.145 kb on + strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.146 kb on - strand, within AO356_14065 at 3192.238 kb on + strand, within AO356_14065 at 3192.239 kb on - strand, within AO356_14065 at 3192.239 kb on - strand, within AO356_14065 at 3192.366 kb on - strand, within AO356_14065 at 3192.366 kb on - strand, within AO356_14065 at 3192.366 kb on - strand, within AO356_14065
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 3,190,292 + AO356_14055 0.42 -0.3 3,190,292 + AO356_14055 0.42 -0.1 3,190,292 + AO356_14055 0.42 -0.1 3,190,361 + AO356_14055 0.47 -0.5 3,190,361 + AO356_14055 0.47 -0.5 3,190,448 + AO356_14055 0.54 -1.4 3,190,448 + AO356_14055 0.54 -0.2 3,190,449 - AO356_14055 0.54 -0.5 3,190,449 - AO356_14055 0.54 +0.3 3,190,449 - AO356_14055 0.54 +0.4 3,190,449 - AO356_14055 0.54 -0.4 3,190,496 + AO356_14055 0.58 +0.6 3,190,497 - AO356_14055 0.58 -0.7 3,190,497 - AO356_14055 0.58 +0.0 3,190,850 + AO356_14055 0.85 +0.4 3,190,850 + AO356_14055 0.85 -0.5 3,190,851 - AO356_14055 0.85 -0.2 3,190,851 - AO356_14055 0.85 +0.2 3,190,878 - AO356_14055 0.87 -0.8 3,190,910 + AO356_14055 0.89 -0.2 3,190,910 + AO356_14055 0.89 -0.0 3,190,910 + AO356_14055 0.89 +0.1 3,190,910 + AO356_14055 0.89 +0.5 3,190,911 - AO356_14055 0.90 -0.4 3,190,926 + +0.1 3,190,926 + -0.2 3,190,926 + +0.2 3,190,927 - -0.4 3,190,927 - +0.6 3,190,927 - +1.3 3,190,969 - +0.4 3,190,969 - +1.1 3,190,982 + +0.4 3,190,983 - -1.1 3,191,120 - +0.2 3,191,120 - +0.1 3,191,120 - -0.2 3,191,121 + -1.0 3,191,151 + -0.8 3,191,151 + -1.3 3,191,151 + -0.0 3,191,151 + -0.4 3,191,151 + +0.3 3,191,151 + +1.3 3,191,151 + -0.6 3,191,152 - +0.2 3,191,152 - -1.4 3,191,152 - +0.8 3,191,201 + -1.4 3,191,201 + -0.2 3,191,202 - +0.0 3,191,295 + AO356_14060 0.23 +0.4 3,191,295 + AO356_14060 0.23 +0.2 3,191,296 - AO356_14060 0.24 +0.8 3,191,296 - AO356_14060 0.24 +0.2 3,191,484 - +0.0 3,191,493 + -0.1 3,191,494 - +0.1 3,191,568 + AO356_14065 0.12 +0.3 3,191,568 + AO356_14065 0.12 -0.1 3,191,569 - AO356_14065 0.12 +0.5 3,191,588 + AO356_14065 0.14 -0.1 3,191,613 + AO356_14065 0.16 +1.0 3,191,614 - AO356_14065 0.16 +0.8 3,191,614 - AO356_14065 0.16 +0.4 3,191,614 - AO356_14065 0.16 -0.1 3,191,614 - AO356_14065 0.16 +0.0 3,191,614 - AO356_14065 0.16 +0.0 3,191,614 - AO356_14065 0.16 +0.1 3,191,767 + AO356_14065 0.30 -0.2 3,191,767 + AO356_14065 0.30 +0.3 3,191,767 + AO356_14065 0.30 +0.9 3,191,768 - AO356_14065 0.30 +1.0 3,191,768 - AO356_14065 0.30 +0.2 3,192,060 + AO356_14065 0.56 +0.5 3,192,061 - AO356_14065 0.56 +0.6 3,192,061 - AO356_14065 0.56 +0.8 3,192,145 + AO356_14065 0.63 -0.2 3,192,145 + AO356_14065 0.63 -0.3 3,192,145 + AO356_14065 0.63 +0.2 3,192,145 + AO356_14065 0.63 -1.8 3,192,145 + AO356_14065 0.63 +0.5 3,192,145 + AO356_14065 0.63 +0.5 3,192,146 - AO356_14065 0.63 +0.8 3,192,146 - AO356_14065 0.63 -1.3 3,192,146 - AO356_14065 0.63 +0.1 3,192,146 - AO356_14065 0.63 +0.5 3,192,146 - AO356_14065 0.63 +0.8 3,192,146 - AO356_14065 0.63 +0.9 3,192,146 - AO356_14065 0.63 +0.3 3,192,238 + AO356_14065 0.72 -0.2 3,192,239 - AO356_14065 0.72 +0.3 3,192,239 - AO356_14065 0.72 -0.1 3,192,366 - AO356_14065 0.83 -0.2 3,192,366 - AO356_14065 0.83 +0.5 3,192,366 - AO356_14065 0.83 +0.5
Or see this region's nucleotide sequence