Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07975 and AO356_07980 are separated by 11 nucleotides AO356_07980 and AO356_07985 overlap by 1 nucleotides
AO356_07975: AO356_07975 - ABC transporter, at 1,787,031 to 1,788,584
_07975
AO356_07980: AO356_07980 - sugar ABC transporter permease, at 1,788,596 to 1,789,702
_07980
AO356_07985: AO356_07985 - ABC transporter permease, at 1,789,702 to 1,790,628
_07985
Position (kb)
1788
1789
1790 Strain fitness (log2 ratio)
-2
-1
0
1 at 1787.621 kb on + strand, within AO356_07975 at 1787.621 kb on + strand, within AO356_07975 at 1787.622 kb on - strand, within AO356_07975 at 1787.775 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1787.816 kb on + strand, within AO356_07975 at 1788.214 kb on + strand, within AO356_07975 at 1788.580 kb on + strand at 1788.658 kb on - strand at 1788.734 kb on + strand, within AO356_07980 at 1788.734 kb on + strand, within AO356_07980 at 1788.734 kb on + strand, within AO356_07980 at 1788.734 kb on + strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.735 kb on - strand, within AO356_07980 at 1788.836 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.058 kb on + strand, within AO356_07980 at 1789.059 kb on - strand, within AO356_07980 at 1789.059 kb on - strand, within AO356_07980 at 1789.059 kb on - strand, within AO356_07980 at 1789.202 kb on + strand, within AO356_07980 at 1789.202 kb on + strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.203 kb on - strand, within AO356_07980 at 1789.440 kb on - strand, within AO356_07980 at 1789.440 kb on - strand, within AO356_07980 at 1789.450 kb on + strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.521 kb on - strand, within AO356_07980 at 1789.726 kb on - strand at 1789.726 kb on - strand at 1789.732 kb on + strand at 1790.074 kb on - strand, within AO356_07985 at 1790.102 kb on + strand, within AO356_07985 at 1790.103 kb on - strand, within AO356_07985 at 1790.103 kb on - strand, within AO356_07985 at 1790.137 kb on + strand, within AO356_07985 at 1790.137 kb on + strand, within AO356_07985 at 1790.137 kb on + strand, within AO356_07985 at 1790.138 kb on - strand, within AO356_07985 at 1790.138 kb on - strand, within AO356_07985 at 1790.138 kb on - strand, within AO356_07985 at 1790.317 kb on + strand, within AO356_07985 at 1790.317 kb on + strand, within AO356_07985 at 1790.317 kb on + strand, within AO356_07985 at 1790.318 kb on - strand, within AO356_07985 at 1790.318 kb on - strand, within AO356_07985 at 1790.318 kb on - strand, within AO356_07985 at 1790.397 kb on - strand, within AO356_07985 at 1790.437 kb on + strand, within AO356_07985 at 1790.437 kb on + strand, within AO356_07985 at 1790.438 kb on - strand, within AO356_07985 at 1790.540 kb on + strand at 1790.540 kb on + strand at 1790.540 kb on + strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.541 kb on - strand at 1790.584 kb on + strand at 1790.631 kb on + strand at 1790.632 kb on - strand at 1790.647 kb on + strand at 1790.647 kb on + strand at 1790.648 kb on - strand at 1790.648 kb on - strand at 1790.673 kb on + strand at 1790.674 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 1,787,621 + AO356_07975 0.38 -2.1 1,787,621 + AO356_07975 0.38 +0.4 1,787,622 - AO356_07975 0.38 -0.1 1,787,775 + AO356_07975 0.48 -1.7 1,787,816 + AO356_07975 0.51 +0.4 1,787,816 + AO356_07975 0.51 -0.5 1,787,816 + AO356_07975 0.51 -1.0 1,787,816 + AO356_07975 0.51 -0.6 1,787,816 + AO356_07975 0.51 -0.2 1,787,816 + AO356_07975 0.51 -0.7 1,787,816 + AO356_07975 0.51 +0.0 1,787,816 + AO356_07975 0.51 -1.0 1,787,816 + AO356_07975 0.51 -0.2 1,788,214 + AO356_07975 0.76 -0.7 1,788,580 + -0.4 1,788,658 - +0.4 1,788,734 + AO356_07980 0.12 +1.3 1,788,734 + AO356_07980 0.12 -1.0 1,788,734 + AO356_07980 0.12 -0.7 1,788,734 + AO356_07980 0.12 -0.2 1,788,735 - AO356_07980 0.13 -0.8 1,788,735 - AO356_07980 0.13 -1.0 1,788,735 - AO356_07980 0.13 -0.2 1,788,735 - AO356_07980 0.13 -0.4 1,788,735 - AO356_07980 0.13 -2.3 1,788,836 + AO356_07980 0.22 -0.1 1,789,058 + AO356_07980 0.42 -0.3 1,789,058 + AO356_07980 0.42 +0.6 1,789,058 + AO356_07980 0.42 +0.5 1,789,058 + AO356_07980 0.42 -0.2 1,789,058 + AO356_07980 0.42 -1.1 1,789,058 + AO356_07980 0.42 -1.3 1,789,059 - AO356_07980 0.42 -1.2 1,789,059 - AO356_07980 0.42 -1.8 1,789,059 - AO356_07980 0.42 -2.3 1,789,202 + AO356_07980 0.55 -0.9 1,789,202 + AO356_07980 0.55 -1.0 1,789,203 - AO356_07980 0.55 -0.7 1,789,203 - AO356_07980 0.55 -1.1 1,789,203 - AO356_07980 0.55 -0.6 1,789,203 - AO356_07980 0.55 -0.6 1,789,440 - AO356_07980 0.76 -1.0 1,789,440 - AO356_07980 0.76 -0.6 1,789,450 + AO356_07980 0.77 +0.1 1,789,521 - AO356_07980 0.84 +0.4 1,789,521 - AO356_07980 0.84 -0.9 1,789,521 - AO356_07980 0.84 -0.9 1,789,521 - AO356_07980 0.84 -0.9 1,789,521 - AO356_07980 0.84 -0.9 1,789,726 - -1.2 1,789,726 - -1.6 1,789,732 + -1.7 1,790,074 - AO356_07985 0.40 +0.2 1,790,102 + AO356_07985 0.43 +0.0 1,790,103 - AO356_07985 0.43 -0.6 1,790,103 - AO356_07985 0.43 -0.6 1,790,137 + AO356_07985 0.47 -0.6 1,790,137 + AO356_07985 0.47 -0.1 1,790,137 + AO356_07985 0.47 -0.1 1,790,138 - AO356_07985 0.47 -1.3 1,790,138 - AO356_07985 0.47 -2.1 1,790,138 - AO356_07985 0.47 -0.8 1,790,317 + AO356_07985 0.66 -0.4 1,790,317 + AO356_07985 0.66 -0.8 1,790,317 + AO356_07985 0.66 -0.6 1,790,318 - AO356_07985 0.66 -0.2 1,790,318 - AO356_07985 0.66 -0.7 1,790,318 - AO356_07985 0.66 -0.6 1,790,397 - AO356_07985 0.75 -1.6 1,790,437 + AO356_07985 0.79 -1.5 1,790,437 + AO356_07985 0.79 -2.4 1,790,438 - AO356_07985 0.79 -1.9 1,790,540 + -0.5 1,790,540 + -0.5 1,790,540 + +0.1 1,790,541 - -0.1 1,790,541 - -0.6 1,790,541 - -1.4 1,790,541 - -0.2 1,790,541 - +0.1 1,790,541 - +0.4 1,790,584 + -0.1 1,790,631 + +0.2 1,790,632 - -0.7 1,790,647 + +0.5 1,790,647 + -0.6 1,790,648 - +0.4 1,790,648 - +0.1 1,790,673 + -0.2 1,790,674 - -0.3
Or see this region's nucleotide sequence