Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04580 and AO356_04585 overlap by 32 nucleotides AO356_04585 and AO356_04590 overlap by 17 nucleotides AO356_04590 and AO356_04595 are separated by 149 nucleotides AO356_04595 and AO356_04600 are separated by 35 nucleotides
AO356_04580: AO356_04580 - L-aspartate oxidase, at 1,032,222 to 1,033,838
_04580
AO356_04585: AO356_04585 - hypothetical protein, at 1,033,807 to 1,034,259
_04585
AO356_04590: AO356_04590 - hypothetical protein, at 1,034,243 to 1,034,497
_04590
AO356_04595: AO356_04595 - aminomethyltransferase, at 1,034,647 to 1,035,588
_04595
AO356_04600: AO356_04600 - histidine kinase, at 1,035,624 to 1,036,445
_04600
Position (kb)
1034
1035
1036 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1033.653 kb on + strand, within AO356_04580 at 1033.654 kb on - strand, within AO356_04580 at 1033.662 kb on + strand, within AO356_04580 at 1033.662 kb on + strand, within AO356_04580 at 1033.662 kb on + strand, within AO356_04580 at 1033.662 kb on + strand, within AO356_04580 at 1033.663 kb on - strand, within AO356_04580 at 1033.663 kb on - strand, within AO356_04580 at 1033.663 kb on - strand, within AO356_04580 at 1033.663 kb on - strand, within AO356_04580 at 1033.764 kb on + strand at 1033.764 kb on + strand at 1033.764 kb on + strand at 1033.764 kb on + strand at 1033.764 kb on + strand at 1033.765 kb on - strand at 1033.765 kb on - strand at 1033.765 kb on - strand at 1033.808 kb on + strand at 1033.808 kb on + strand at 1033.809 kb on - strand at 1033.809 kb on - strand at 1033.809 kb on - strand at 1033.827 kb on + strand at 1033.827 kb on + strand at 1033.827 kb on + strand at 1033.828 kb on - strand at 1033.828 kb on - strand at 1033.968 kb on + strand, within AO356_04585 at 1034.244 kb on + strand at 1034.244 kb on + strand at 1034.244 kb on + strand at 1034.244 kb on + strand at 1034.245 kb on - strand at 1034.245 kb on - strand at 1034.245 kb on - strand at 1034.245 kb on - strand at 1034.245 kb on - strand at 1034.514 kb on - strand at 1034.514 kb on - strand at 1034.525 kb on - strand at 1034.525 kb on - strand at 1034.526 kb on + strand at 1034.526 kb on + strand at 1034.526 kb on + strand at 1034.527 kb on - strand at 1034.527 kb on - strand at 1034.527 kb on - strand at 1034.527 kb on - strand at 1034.587 kb on + strand at 1034.610 kb on + strand at 1034.611 kb on - strand at 1034.611 kb on - strand at 1034.611 kb on - strand at 1034.619 kb on + strand at 1035.554 kb on - strand at 1035.612 kb on + strand at 1035.786 kb on - strand, within AO356_04600 at 1035.891 kb on + strand, within AO356_04600 at 1035.891 kb on + strand, within AO356_04600 at 1035.891 kb on + strand, within AO356_04600 at 1035.891 kb on + strand, within AO356_04600 at 1035.892 kb on - strand, within AO356_04600 at 1035.953 kb on - strand, within AO356_04600 at 1035.953 kb on - strand, within AO356_04600 at 1035.953 kb on - strand, within AO356_04600 at 1036.011 kb on + strand, within AO356_04600 at 1036.011 kb on + strand, within AO356_04600 at 1036.011 kb on + strand, within AO356_04600 at 1036.011 kb on + strand, within AO356_04600 at 1036.011 kb on + strand, within AO356_04600 at 1036.011 kb on + strand, within AO356_04600 at 1036.011 kb on + strand, within AO356_04600 at 1036.012 kb on - strand, within AO356_04600 at 1036.012 kb on - strand, within AO356_04600 at 1036.012 kb on - strand, within AO356_04600 at 1036.029 kb on + strand, within AO356_04600 at 1036.029 kb on + strand, within AO356_04600 at 1036.104 kb on + strand, within AO356_04600 at 1036.104 kb on + strand, within AO356_04600 at 1036.104 kb on + strand, within AO356_04600 at 1036.104 kb on + strand, within AO356_04600 at 1036.105 kb on - strand, within AO356_04600 at 1036.105 kb on - strand, within AO356_04600 at 1036.105 kb on - strand, within AO356_04600 at 1036.105 kb on - strand, within AO356_04600 at 1036.105 kb on - strand, within AO356_04600 at 1036.105 kb on - strand, within AO356_04600 at 1036.105 kb on - strand, within AO356_04600 at 1036.119 kb on - strand, within AO356_04600 at 1036.119 kb on - strand, within AO356_04600 at 1036.126 kb on + strand, within AO356_04600 at 1036.127 kb on - strand, within AO356_04600 at 1036.127 kb on - strand, within AO356_04600 at 1036.127 kb on - strand, within AO356_04600 at 1036.127 kb on - strand, within AO356_04600 at 1036.242 kb on + strand, within AO356_04600 at 1036.242 kb on + strand, within AO356_04600 at 1036.242 kb on + strand, within AO356_04600 at 1036.243 kb on - strand, within AO356_04600 at 1036.243 kb on - strand, within AO356_04600 at 1036.278 kb on + strand, within AO356_04600 at 1036.279 kb on - strand, within AO356_04600 at 1036.308 kb on + strand, within AO356_04600 at 1036.308 kb on + strand, within AO356_04600 at 1036.309 kb on - strand, within AO356_04600 at 1036.309 kb on - strand, within AO356_04600 at 1036.309 kb on - strand, within AO356_04600 at 1036.309 kb on - strand, within AO356_04600 at 1036.309 kb on - strand, within AO356_04600 at 1036.309 kb on - strand, within AO356_04600 at 1036.309 kb on - strand, within AO356_04600 at 1036.309 kb on - strand, within AO356_04600 at 1036.314 kb on + strand, within AO356_04600 at 1036.314 kb on + strand, within AO356_04600 at 1036.314 kb on + strand, within AO356_04600 at 1036.314 kb on + strand, within AO356_04600 at 1036.314 kb on + strand, within AO356_04600 at 1036.314 kb on + strand, within AO356_04600 at 1036.314 kb on + strand, within AO356_04600 at 1036.315 kb on - strand, within AO356_04600 at 1036.315 kb on - strand, within AO356_04600 at 1036.315 kb on - strand, within AO356_04600 at 1036.315 kb on - strand, within AO356_04600 at 1036.315 kb on - strand, within AO356_04600 at 1036.315 kb on - strand, within AO356_04600 at 1036.351 kb on + strand, within AO356_04600 at 1036.351 kb on + strand, within AO356_04600 at 1036.351 kb on + strand, within AO356_04600 at 1036.352 kb on - strand, within AO356_04600 at 1036.352 kb on - strand, within AO356_04600 at 1036.352 kb on - strand, within AO356_04600 at 1036.440 kb on + strand at 1036.444 kb on - strand at 1036.463 kb on + strand at 1036.463 kb on + strand at 1036.463 kb on + strand at 1036.463 kb on + strand at 1036.463 kb on + strand at 1036.463 kb on + strand at 1036.463 kb on + strand at 1036.463 kb on + strand at 1036.463 kb on + strand at 1036.464 kb on - strand at 1036.464 kb on - strand at 1036.464 kb on - strand at 1036.464 kb on - strand at 1036.552 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 1,033,653 + AO356_04580 0.88 -0.1 1,033,654 - AO356_04580 0.89 +0.5 1,033,662 + AO356_04580 0.89 +0.4 1,033,662 + AO356_04580 0.89 +1.5 1,033,662 + AO356_04580 0.89 -0.4 1,033,662 + AO356_04580 0.89 +0.3 1,033,663 - AO356_04580 0.89 +0.1 1,033,663 - AO356_04580 0.89 +0.0 1,033,663 - AO356_04580 0.89 -0.1 1,033,663 - AO356_04580 0.89 +0.1 1,033,764 + +0.8 1,033,764 + -0.4 1,033,764 + -0.0 1,033,764 + -0.3 1,033,764 + -0.6 1,033,765 - -0.8 1,033,765 - -0.0 1,033,765 - -0.3 1,033,808 + +0.1 1,033,808 + +0.5 1,033,809 - +0.7 1,033,809 - -1.2 1,033,809 - -0.1 1,033,827 + +0.8 1,033,827 + -0.5 1,033,827 + -0.0 1,033,828 - -0.2 1,033,828 - +1.1 1,033,968 + AO356_04585 0.36 +1.3 1,034,244 + +1.3 1,034,244 + -0.0 1,034,244 + +1.3 1,034,244 + +0.3 1,034,245 - -0.2 1,034,245 - +0.3 1,034,245 - -0.7 1,034,245 - +0.2 1,034,245 - +0.1 1,034,514 - +0.4 1,034,514 - -0.3 1,034,525 - +0.6 1,034,525 - +0.8 1,034,526 + -0.8 1,034,526 + -0.2 1,034,526 + +0.6 1,034,527 - +0.5 1,034,527 - +1.2 1,034,527 - +0.4 1,034,527 - +0.5 1,034,587 + -0.0 1,034,610 + +0.2 1,034,611 - -0.4 1,034,611 - -0.3 1,034,611 - -0.7 1,034,619 + -0.0 1,035,554 - -0.1 1,035,612 + -0.7 1,035,786 - AO356_04600 0.20 -0.5 1,035,891 + AO356_04600 0.32 -3.2 1,035,891 + AO356_04600 0.32 -0.7 1,035,891 + AO356_04600 0.32 -1.6 1,035,891 + AO356_04600 0.32 -1.7 1,035,892 - AO356_04600 0.33 -0.3 1,035,953 - AO356_04600 0.40 -1.5 1,035,953 - AO356_04600 0.40 -0.1 1,035,953 - AO356_04600 0.40 -1.4 1,036,011 + AO356_04600 0.47 -0.2 1,036,011 + AO356_04600 0.47 -0.1 1,036,011 + AO356_04600 0.47 -0.3 1,036,011 + AO356_04600 0.47 -0.1 1,036,011 + AO356_04600 0.47 +0.0 1,036,011 + AO356_04600 0.47 +0.4 1,036,011 + AO356_04600 0.47 -0.2 1,036,012 - AO356_04600 0.47 -0.5 1,036,012 - AO356_04600 0.47 -0.2 1,036,012 - AO356_04600 0.47 -1.0 1,036,029 + AO356_04600 0.49 +0.2 1,036,029 + AO356_04600 0.49 -0.2 1,036,104 + AO356_04600 0.58 -0.8 1,036,104 + AO356_04600 0.58 +0.5 1,036,104 + AO356_04600 0.58 -0.7 1,036,104 + AO356_04600 0.58 -0.8 1,036,105 - AO356_04600 0.59 -0.9 1,036,105 - AO356_04600 0.59 -1.0 1,036,105 - AO356_04600 0.59 -1.1 1,036,105 - AO356_04600 0.59 -0.5 1,036,105 - AO356_04600 0.59 -0.1 1,036,105 - AO356_04600 0.59 -1.5 1,036,105 - AO356_04600 0.59 +0.3 1,036,119 - AO356_04600 0.60 -1.8 1,036,119 - AO356_04600 0.60 +0.5 1,036,126 + AO356_04600 0.61 -0.5 1,036,127 - AO356_04600 0.61 -0.0 1,036,127 - AO356_04600 0.61 -0.5 1,036,127 - AO356_04600 0.61 -0.7 1,036,127 - AO356_04600 0.61 +0.0 1,036,242 + AO356_04600 0.75 +0.2 1,036,242 + AO356_04600 0.75 +0.2 1,036,242 + AO356_04600 0.75 -0.8 1,036,243 - AO356_04600 0.75 -0.8 1,036,243 - AO356_04600 0.75 -2.0 1,036,278 + AO356_04600 0.80 -0.1 1,036,279 - AO356_04600 0.80 -0.7 1,036,308 + AO356_04600 0.83 -1.4 1,036,308 + AO356_04600 0.83 -1.5 1,036,309 - AO356_04600 0.83 -1.6 1,036,309 - AO356_04600 0.83 +0.7 1,036,309 - AO356_04600 0.83 -0.3 1,036,309 - AO356_04600 0.83 -0.4 1,036,309 - AO356_04600 0.83 -0.9 1,036,309 - AO356_04600 0.83 -0.2 1,036,309 - AO356_04600 0.83 -0.4 1,036,309 - AO356_04600 0.83 -0.7 1,036,314 + AO356_04600 0.84 -0.8 1,036,314 + AO356_04600 0.84 -0.8 1,036,314 + AO356_04600 0.84 +0.7 1,036,314 + AO356_04600 0.84 -0.5 1,036,314 + AO356_04600 0.84 -1.2 1,036,314 + AO356_04600 0.84 +0.7 1,036,314 + AO356_04600 0.84 -0.6 1,036,315 - AO356_04600 0.84 -0.1 1,036,315 - AO356_04600 0.84 -1.2 1,036,315 - AO356_04600 0.84 -0.3 1,036,315 - AO356_04600 0.84 -0.3 1,036,315 - AO356_04600 0.84 +1.0 1,036,315 - AO356_04600 0.84 -2.7 1,036,351 + AO356_04600 0.88 -1.1 1,036,351 + AO356_04600 0.88 -0.3 1,036,351 + AO356_04600 0.88 -0.1 1,036,352 - AO356_04600 0.89 -0.3 1,036,352 - AO356_04600 0.89 -1.1 1,036,352 - AO356_04600 0.89 -1.1 1,036,440 + -0.1 1,036,444 - +0.2 1,036,463 + -0.1 1,036,463 + -0.7 1,036,463 + -0.7 1,036,463 + -0.1 1,036,463 + +0.8 1,036,463 + -0.2 1,036,463 + +0.4 1,036,463 + +0.7 1,036,463 + -0.7 1,036,464 - -0.5 1,036,464 - -0.5 1,036,464 - +0.2 1,036,464 - -0.2 1,036,552 + -0.1
Or see this region's nucleotide sequence