Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02740 and AO356_02745 are separated by 4 nucleotides AO356_02745 and AO356_02750 are separated by 245 nucleotides AO356_02750 and AO356_02755 are separated by 14 nucleotides
AO356_02740: AO356_02740 - protein InvG, at 600,345 to 602,000
_02740
AO356_02745: AO356_02745 - transcriptional regulator, at 602,005 to 602,742
_02745
AO356_02750: AO356_02750 - nitrate transporter, at 602,988 to 604,199
_02750
AO356_02755: AO356_02755 - histidine kinase, at 604,214 to 604,789
_02755
Position (kb) 602
603
604
605 Strain fitness (log2 ratio) -1
0
1
2 at 602.021 kb on + strand at 602.022 kb on - strand at 602.152 kb on + strand, within AO356_02745 at 602.290 kb on - strand, within AO356_02745 at 602.360 kb on + strand, within AO356_02745 at 602.393 kb on + strand, within AO356_02745 at 602.393 kb on + strand, within AO356_02745 at 602.393 kb on + strand, within AO356_02745 at 602.394 kb on - strand, within AO356_02745 at 602.394 kb on - strand, within AO356_02745 at 602.503 kb on - strand, within AO356_02745 at 602.839 kb on + strand at 602.839 kb on + strand at 602.839 kb on + strand at 602.855 kb on - strand at 602.967 kb on + strand at 602.968 kb on - strand at 602.968 kb on - strand at 602.973 kb on + strand at 602.974 kb on - strand at 602.974 kb on - strand at 603.129 kb on + strand, within AO356_02750 at 603.222 kb on + strand, within AO356_02750 at 603.235 kb on - strand, within AO356_02750 at 603.235 kb on - strand, within AO356_02750 at 603.447 kb on + strand, within AO356_02750 at 603.448 kb on - strand, within AO356_02750 at 603.450 kb on + strand, within AO356_02750 at 603.450 kb on + strand, within AO356_02750 at 603.450 kb on + strand, within AO356_02750 at 603.451 kb on - strand, within AO356_02750 at 603.451 kb on - strand, within AO356_02750 at 603.608 kb on + strand, within AO356_02750 at 603.608 kb on + strand, within AO356_02750 at 603.688 kb on - strand, within AO356_02750 at 603.799 kb on - strand, within AO356_02750 at 603.846 kb on + strand, within AO356_02750 at 603.846 kb on + strand, within AO356_02750 at 603.846 kb on + strand, within AO356_02750 at 603.847 kb on - strand, within AO356_02750 at 603.847 kb on - strand, within AO356_02750 at 603.924 kb on + strand, within AO356_02750 at 603.924 kb on + strand, within AO356_02750 at 603.924 kb on + strand, within AO356_02750 at 603.924 kb on + strand, within AO356_02750 at 603.993 kb on + strand, within AO356_02750 at 603.993 kb on + strand, within AO356_02750 at 603.994 kb on - strand, within AO356_02750 at 604.032 kb on + strand, within AO356_02750 at 604.033 kb on - strand, within AO356_02750 at 604.109 kb on + strand at 604.109 kb on + strand at 604.508 kb on + strand, within AO356_02755 at 604.508 kb on + strand, within AO356_02755 at 604.508 kb on + strand, within AO356_02755 at 604.508 kb on + strand, within AO356_02755 at 604.508 kb on + strand, within AO356_02755 at 604.508 kb on + strand, within AO356_02755 at 604.508 kb on + strand, within AO356_02755 at 604.509 kb on - strand, within AO356_02755 at 604.509 kb on - strand, within AO356_02755 at 604.509 kb on - strand, within AO356_02755 at 604.509 kb on - strand, within AO356_02755 at 604.509 kb on - strand, within AO356_02755 at 604.510 kb on + strand, within AO356_02755 at 604.511 kb on - strand, within AO356_02755 at 604.698 kb on - strand, within AO356_02755 at 604.698 kb on - strand, within AO356_02755 at 604.860 kb on + strand at 604.860 kb on + strand at 604.860 kb on + strand at 605.142 kb on + strand at 605.142 kb on + strand at 605.142 kb on + strand at 605.142 kb on + strand at 605.143 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 602,021 + -0.4 602,022 - +0.0 602,152 + AO356_02745 0.20 -0.6 602,290 - AO356_02745 0.39 +0.6 602,360 + AO356_02745 0.48 +0.1 602,393 + AO356_02745 0.53 -0.1 602,393 + AO356_02745 0.53 +0.6 602,393 + AO356_02745 0.53 +1.5 602,394 - AO356_02745 0.53 +0.3 602,394 - AO356_02745 0.53 -0.1 602,503 - AO356_02745 0.67 +0.3 602,839 + -0.4 602,839 + -0.9 602,839 + +0.1 602,855 - +0.5 602,967 + -0.1 602,968 - +0.3 602,968 - -0.0 602,973 + +0.8 602,974 - -0.1 602,974 - -0.4 603,129 + AO356_02750 0.12 +2.2 603,222 + AO356_02750 0.19 +1.1 603,235 - AO356_02750 0.20 +0.3 603,235 - AO356_02750 0.20 -0.3 603,447 + AO356_02750 0.38 +1.0 603,448 - AO356_02750 0.38 -0.3 603,450 + AO356_02750 0.38 +1.3 603,450 + AO356_02750 0.38 +2.2 603,450 + AO356_02750 0.38 +1.0 603,451 - AO356_02750 0.38 +0.5 603,451 - AO356_02750 0.38 +0.1 603,608 + AO356_02750 0.51 +1.6 603,608 + AO356_02750 0.51 +1.0 603,688 - AO356_02750 0.58 +0.0 603,799 - AO356_02750 0.67 +0.7 603,846 + AO356_02750 0.71 +0.8 603,846 + AO356_02750 0.71 +1.4 603,846 + AO356_02750 0.71 +1.4 603,847 - AO356_02750 0.71 +0.4 603,847 - AO356_02750 0.71 +0.1 603,924 + AO356_02750 0.77 +1.3 603,924 + AO356_02750 0.77 +1.5 603,924 + AO356_02750 0.77 +1.6 603,924 + AO356_02750 0.77 +2.0 603,993 + AO356_02750 0.83 +0.1 603,993 + AO356_02750 0.83 +1.8 603,994 - AO356_02750 0.83 -0.4 604,032 + AO356_02750 0.86 +1.2 604,033 - AO356_02750 0.86 -0.4 604,109 + +1.3 604,109 + +1.7 604,508 + AO356_02755 0.51 -1.2 604,508 + AO356_02755 0.51 +0.3 604,508 + AO356_02755 0.51 -0.1 604,508 + AO356_02755 0.51 +0.1 604,508 + AO356_02755 0.51 -0.4 604,508 + AO356_02755 0.51 -0.3 604,508 + AO356_02755 0.51 -0.2 604,509 - AO356_02755 0.51 -0.2 604,509 - AO356_02755 0.51 +0.4 604,509 - AO356_02755 0.51 +0.2 604,509 - AO356_02755 0.51 +0.1 604,509 - AO356_02755 0.51 +0.1 604,510 + AO356_02755 0.51 +0.5 604,511 - AO356_02755 0.52 +0.7 604,698 - AO356_02755 0.84 +0.4 604,698 - AO356_02755 0.84 -1.4 604,860 + +0.0 604,860 + +0.1 604,860 + -1.4 605,142 + -0.5 605,142 + -1.4 605,142 + -1.5 605,142 + -0.2 605,143 - +0.6
Or see this region's nucleotide sequence