Experiment: 9 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2680 and DvMF_2681 are separated by 348 nucleotides DvMF_2681 and DvMF_2682 are separated by 85 nucleotides
DvMF_2680: DvMF_2680 - 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq), at 3,387,457 to 3,388,110
_2680
DvMF_2681: DvMF_2681 - ribonuclease BN (RefSeq), at 3,388,459 to 3,390,144
_2681
DvMF_2682: DvMF_2682 - Membrane-bound lytic murein transglycosylase B-like protein (RefSeq), at 3,390,230 to 3,391,501
_2682
Position (kb)
3388
3389
3390
3391 Strain fitness (log2 ratio)
-1
0
1 at 3387.981 kb on - strand, within DvMF_2680 at 3388.023 kb on - strand, within DvMF_2680 at 3388.248 kb on - strand at 3388.474 kb on + strand at 3388.546 kb on + strand at 3388.791 kb on - strand, within DvMF_2681 at 3388.817 kb on + strand, within DvMF_2681 at 3388.825 kb on - strand, within DvMF_2681 at 3389.323 kb on - strand, within DvMF_2681 at 3389.604 kb on + strand, within DvMF_2681 at 3389.870 kb on - strand, within DvMF_2681 at 3389.951 kb on - strand, within DvMF_2681 at 3390.029 kb on + strand at 3390.129 kb on + strand at 3390.137 kb on - strand at 3390.253 kb on + strand at 3390.297 kb on + strand at 3390.302 kb on + strand at 3390.331 kb on + strand at 3390.344 kb on + strand at 3390.344 kb on + strand at 3390.637 kb on + strand, within DvMF_2682 at 3390.644 kb on + strand, within DvMF_2682 at 3390.878 kb on + strand, within DvMF_2682
Per-strain Table
Position Strand Gene LocusTag Fraction 9 day starvation, 37C remove 3,387,981 - DvMF_2680 0.80 +0.5 3,388,023 - DvMF_2680 0.87 +0.5 3,388,248 - +0.4 3,388,474 + +0.3 3,388,546 + +0.2 3,388,791 - DvMF_2681 0.20 +0.2 3,388,817 + DvMF_2681 0.21 -1.5 3,388,825 - DvMF_2681 0.22 -0.9 3,389,323 - DvMF_2681 0.51 -1.0 3,389,604 + DvMF_2681 0.68 +0.1 3,389,870 - DvMF_2681 0.84 -0.3 3,389,951 - DvMF_2681 0.88 +0.1 3,390,029 + +0.2 3,390,129 + -1.0 3,390,137 - -0.2 3,390,253 + +0.6 3,390,297 + +0.6 3,390,302 + -0.0 3,390,331 + +0.6 3,390,344 + -0.1 3,390,344 + -0.4 3,390,637 + DvMF_2682 0.32 -0.1 3,390,644 + DvMF_2682 0.33 +0.1 3,390,878 + DvMF_2682 0.51 -0.7
Or see this region's nucleotide sequence