Experiment: 9 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2190 and DvMF_2191 are separated by 27 nucleotides DvMF_2191 and DvMF_2192 are separated by 87 nucleotides DvMF_2192 and DvMF_2193 are separated by 97 nucleotides
DvMF_2190: DvMF_2190 - phosphonate ABC transporter, periplasmic phosphonate-binding protein (RefSeq), at 2,735,941 to 2,736,885
_2190
DvMF_2191: DvMF_2191 - hypothetical protein (RefSeq), at 2,736,913 to 2,737,626
_2191
DvMF_2192: DvMF_2192 - protein of unknown function DUF81 (RefSeq), at 2,737,714 to 2,738,856
_2192
DvMF_2193: DvMF_2193 - protein of unknown function DUF169 (RefSeq), at 2,738,954 to 2,739,730
_2193
Position (kb)
2737
2738
2739 Strain fitness (log2 ratio)
-1
0
1 at 2736.968 kb on - strand at 2736.973 kb on - strand at 2737.022 kb on - strand, within DvMF_2191 at 2737.186 kb on + strand, within DvMF_2191 at 2737.191 kb on + strand, within DvMF_2191 at 2737.194 kb on - strand, within DvMF_2191 at 2737.199 kb on - strand, within DvMF_2191 at 2737.231 kb on - strand, within DvMF_2191 at 2737.265 kb on + strand, within DvMF_2191 at 2737.306 kb on + strand, within DvMF_2191 at 2737.321 kb on - strand, within DvMF_2191 at 2737.411 kb on - strand, within DvMF_2191 at 2737.534 kb on - strand, within DvMF_2191 at 2737.608 kb on - strand at 2737.638 kb on - strand at 2737.752 kb on + strand at 2738.096 kb on - strand, within DvMF_2192 at 2738.142 kb on + strand, within DvMF_2192 at 2738.289 kb on + strand, within DvMF_2192 at 2738.316 kb on + strand, within DvMF_2192 at 2738.524 kb on + strand, within DvMF_2192 at 2738.656 kb on + strand, within DvMF_2192 at 2738.675 kb on - strand, within DvMF_2192 at 2738.680 kb on - strand, within DvMF_2192 at 2738.856 kb on + strand at 2739.135 kb on - strand, within DvMF_2193 at 2739.254 kb on - strand, within DvMF_2193 at 2739.369 kb on + strand, within DvMF_2193 at 2739.377 kb on - strand, within DvMF_2193 at 2739.421 kb on + strand, within DvMF_2193 at 2739.509 kb on + strand, within DvMF_2193 at 2739.517 kb on - strand, within DvMF_2193 at 2739.517 kb on - strand, within DvMF_2193 at 2739.537 kb on + strand, within DvMF_2193 at 2739.579 kb on - strand, within DvMF_2193 at 2739.587 kb on - strand, within DvMF_2193 at 2739.606 kb on - strand, within DvMF_2193 at 2739.738 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 9 day starvation, 37C remove 2,736,968 - +0.3 2,736,973 - +0.1 2,737,022 - DvMF_2191 0.15 -0.3 2,737,186 + DvMF_2191 0.38 -0.5 2,737,191 + DvMF_2191 0.39 -0.4 2,737,194 - DvMF_2191 0.39 -0.7 2,737,199 - DvMF_2191 0.40 -1.0 2,737,231 - DvMF_2191 0.45 -1.0 2,737,265 + DvMF_2191 0.49 -0.3 2,737,306 + DvMF_2191 0.55 +0.1 2,737,321 - DvMF_2191 0.57 -1.5 2,737,411 - DvMF_2191 0.70 -0.6 2,737,534 - DvMF_2191 0.87 +0.1 2,737,608 - -0.9 2,737,638 - +0.4 2,737,752 + -0.2 2,738,096 - DvMF_2192 0.33 -1.0 2,738,142 + DvMF_2192 0.37 -1.1 2,738,289 + DvMF_2192 0.50 -0.6 2,738,316 + DvMF_2192 0.53 -0.8 2,738,524 + DvMF_2192 0.71 -0.5 2,738,656 + DvMF_2192 0.82 -0.6 2,738,675 - DvMF_2192 0.84 -0.5 2,738,680 - DvMF_2192 0.85 -1.3 2,738,856 + +0.1 2,739,135 - DvMF_2193 0.23 -0.6 2,739,254 - DvMF_2193 0.39 -0.2 2,739,369 + DvMF_2193 0.53 -0.3 2,739,377 - DvMF_2193 0.54 +0.2 2,739,421 + DvMF_2193 0.60 -0.6 2,739,509 + DvMF_2193 0.71 -0.4 2,739,517 - DvMF_2193 0.72 -0.1 2,739,517 - DvMF_2193 0.72 -0.7 2,739,537 + DvMF_2193 0.75 -1.2 2,739,579 - DvMF_2193 0.80 -0.7 2,739,587 - DvMF_2193 0.81 +0.4 2,739,606 - DvMF_2193 0.84 +1.0 2,739,738 + +0.1
Or see this region's nucleotide sequence