Experiment: 9 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2181 and DvMF_2182 are separated by 340 nucleotides DvMF_2182 and DvMF_2183 are separated by 499 nucleotides
DvMF_2181: DvMF_2181 - heat shock protein Hsp20 (RefSeq), at 2,720,693 to 2,721,304
_2181
DvMF_2182: DvMF_2182 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,721,645 to 2,723,423
_2182
DvMF_2183: DvMF_2183 - malate synthase G (RefSeq), at 2,723,923 to 2,726,118
_2183
Position (kb)
2721
2722
2723
2724 Strain fitness (log2 ratio)
-2
-1
0
1 at 2720.883 kb on + strand, within DvMF_2181 at 2721.069 kb on - strand, within DvMF_2181 at 2721.138 kb on - strand, within DvMF_2181 at 2721.172 kb on - strand, within DvMF_2181 at 2721.373 kb on - strand at 2721.456 kb on + strand at 2721.530 kb on + strand at 2721.600 kb on - strand at 2721.620 kb on + strand at 2721.650 kb on - strand at 2721.731 kb on + strand at 2722.275 kb on + strand, within DvMF_2182 at 2722.282 kb on + strand, within DvMF_2182 at 2722.377 kb on + strand, within DvMF_2182 at 2722.477 kb on + strand, within DvMF_2182 at 2722.487 kb on + strand, within DvMF_2182 at 2722.547 kb on - strand, within DvMF_2182 at 2722.562 kb on - strand, within DvMF_2182 at 2722.562 kb on - strand, within DvMF_2182 at 2722.739 kb on + strand, within DvMF_2182 at 2722.829 kb on - strand, within DvMF_2182 at 2722.924 kb on + strand, within DvMF_2182 at 2722.932 kb on - strand, within DvMF_2182 at 2722.932 kb on - strand, within DvMF_2182 at 2722.996 kb on - strand, within DvMF_2182 at 2723.172 kb on + strand, within DvMF_2182 at 2723.246 kb on + strand at 2723.254 kb on - strand at 2723.256 kb on + strand at 2723.462 kb on - strand at 2723.580 kb on - strand at 2723.647 kb on - strand at 2723.698 kb on + strand at 2723.772 kb on - strand at 2723.914 kb on - strand at 2723.941 kb on - strand at 2724.016 kb on - strand at 2724.150 kb on + strand, within DvMF_2183 at 2724.213 kb on - strand, within DvMF_2183 at 2724.266 kb on - strand, within DvMF_2183 at 2724.414 kb on - strand, within DvMF_2183 at 2724.416 kb on - strand, within DvMF_2183
Per-strain Table
Position Strand Gene LocusTag Fraction 9 day starvation, 37C remove 2,720,883 + DvMF_2181 0.31 -0.4 2,721,069 - DvMF_2181 0.61 -0.8 2,721,138 - DvMF_2181 0.73 +0.2 2,721,172 - DvMF_2181 0.78 +0.1 2,721,373 - +0.3 2,721,456 + -0.2 2,721,530 + -0.2 2,721,600 - -0.1 2,721,620 + +1.1 2,721,650 - -0.5 2,721,731 + -1.3 2,722,275 + DvMF_2182 0.35 +0.3 2,722,282 + DvMF_2182 0.36 -0.1 2,722,377 + DvMF_2182 0.41 -0.2 2,722,477 + DvMF_2182 0.47 +0.7 2,722,487 + DvMF_2182 0.47 +0.4 2,722,547 - DvMF_2182 0.51 +0.2 2,722,562 - DvMF_2182 0.52 +0.1 2,722,562 - DvMF_2182 0.52 -1.6 2,722,739 + DvMF_2182 0.61 +1.0 2,722,829 - DvMF_2182 0.67 +1.0 2,722,924 + DvMF_2182 0.72 -0.1 2,722,932 - DvMF_2182 0.72 +0.5 2,722,932 - DvMF_2182 0.72 -2.0 2,722,996 - DvMF_2182 0.76 +0.5 2,723,172 + DvMF_2182 0.86 +0.2 2,723,246 + -0.4 2,723,254 - -0.1 2,723,256 + +0.4 2,723,462 - +0.1 2,723,580 - +0.2 2,723,647 - -0.3 2,723,698 + +0.0 2,723,772 - +0.1 2,723,914 - +0.2 2,723,941 - -0.5 2,724,016 - -0.2 2,724,150 + DvMF_2183 0.10 -0.1 2,724,213 - DvMF_2183 0.13 -0.6 2,724,266 - DvMF_2183 0.16 +0.0 2,724,414 - DvMF_2183 0.22 -0.6 2,724,416 - DvMF_2183 0.22 +0.6
Or see this region's nucleotide sequence