Experiment: 9 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0507 and DvMF_0508 overlap by 4 nucleotides DvMF_0508 and DvMF_0509 are separated by 350 nucleotides
DvMF_0507: DvMF_0507 - glycosyl transferase group 1 (RefSeq), at 595,724 to 596,998
_0507
DvMF_0508: DvMF_0508 - glycosyl transferase group 1 (RefSeq), at 596,995 to 598,908
_0508
DvMF_0509: DvMF_0509 - diguanylate cyclase (RefSeq), at 599,259 to 600,755
_0509
Position (kb) 596
597
598
599 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 596.177 kb on - strand, within DvMF_0507 at 596.184 kb on + strand, within DvMF_0507 at 596.198 kb on - strand, within DvMF_0507 at 596.316 kb on - strand, within DvMF_0507 at 596.526 kb on - strand, within DvMF_0507 at 596.536 kb on + strand, within DvMF_0507 at 596.726 kb on - strand, within DvMF_0507 at 596.798 kb on + strand, within DvMF_0507 at 596.892 kb on - strand at 597.002 kb on - strand at 597.282 kb on - strand, within DvMF_0508 at 597.410 kb on + strand, within DvMF_0508 at 597.429 kb on + strand, within DvMF_0508 at 597.569 kb on + strand, within DvMF_0508 at 597.592 kb on + strand, within DvMF_0508 at 597.685 kb on + strand, within DvMF_0508 at 597.907 kb on - strand, within DvMF_0508 at 597.917 kb on - strand, within DvMF_0508 at 597.917 kb on - strand, within DvMF_0508 at 598.013 kb on - strand, within DvMF_0508 at 598.072 kb on - strand, within DvMF_0508 at 598.190 kb on - strand, within DvMF_0508 at 598.204 kb on - strand, within DvMF_0508 at 598.267 kb on - strand, within DvMF_0508 at 598.267 kb on - strand, within DvMF_0508 at 598.358 kb on + strand, within DvMF_0508 at 598.358 kb on + strand, within DvMF_0508 at 598.358 kb on + strand, within DvMF_0508 at 598.421 kb on - strand, within DvMF_0508 at 598.484 kb on + strand, within DvMF_0508 at 598.570 kb on - strand, within DvMF_0508 at 598.628 kb on + strand, within DvMF_0508 at 598.770 kb on - strand at 598.787 kb on - strand at 598.792 kb on - strand at 599.081 kb on - strand at 599.096 kb on - strand at 599.121 kb on - strand at 599.259 kb on + strand at 599.351 kb on - strand at 599.760 kb on - strand, within DvMF_0509
Per-strain Table
Position Strand Gene LocusTag Fraction 9 day starvation, 37C remove 596,177 - DvMF_0507 0.36 +1.9 596,184 + DvMF_0507 0.36 +1.6 596,198 - DvMF_0507 0.37 +1.6 596,316 - DvMF_0507 0.46 +1.6 596,526 - DvMF_0507 0.63 +1.7 596,536 + DvMF_0507 0.64 +1.4 596,726 - DvMF_0507 0.79 +3.5 596,798 + DvMF_0507 0.84 +1.7 596,892 - +2.0 597,002 - +0.5 597,282 - DvMF_0508 0.15 +0.5 597,410 + DvMF_0508 0.22 +0.9 597,429 + DvMF_0508 0.23 +1.4 597,569 + DvMF_0508 0.30 +0.3 597,592 + DvMF_0508 0.31 +0.7 597,685 + DvMF_0508 0.36 +0.8 597,907 - DvMF_0508 0.48 +0.3 597,917 - DvMF_0508 0.48 +1.0 597,917 - DvMF_0508 0.48 +0.4 598,013 - DvMF_0508 0.53 +0.3 598,072 - DvMF_0508 0.56 +0.7 598,190 - DvMF_0508 0.62 -0.9 598,204 - DvMF_0508 0.63 +0.5 598,267 - DvMF_0508 0.66 +0.7 598,267 - DvMF_0508 0.66 +0.8 598,358 + DvMF_0508 0.71 +0.9 598,358 + DvMF_0508 0.71 +0.9 598,358 + DvMF_0508 0.71 +0.9 598,421 - DvMF_0508 0.75 +0.7 598,484 + DvMF_0508 0.78 +1.4 598,570 - DvMF_0508 0.82 +0.2 598,628 + DvMF_0508 0.85 +0.5 598,770 - +0.7 598,787 - +1.3 598,792 - +1.1 599,081 - -2.3 599,096 - -0.1 599,121 - +0.1 599,259 + +0.5 599,351 - +0.4 599,760 - DvMF_0509 0.33 +0.4
Or see this region's nucleotide sequence