Experiment: 9 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0279 and DvMF_0280 are separated by 109 nucleotides DvMF_0280 and DvMF_0281 are separated by 147 nucleotides DvMF_0281 and DvMF_0282 are separated by 350 nucleotides
DvMF_0279: DvMF_0279 - carbohydrate kinase, YjeF related protein (RefSeq), at 318,993 to 320,738
_0279
DvMF_0280: DvMF_0280 - holo-acyl-carrier-protein synthase (RefSeq), at 320,848 to 321,219
_0280
DvMF_0281: DvMF_0281 - pyridoxine 5'-phosphate synthase (RefSeq), at 321,367 to 322,092
_0281
DvMF_0282: DvMF_0282 - nucleotide sugar dehydrogenase (RefSeq), at 322,443 to 323,780
_0282
Position (kb) 321
322
323 Strain fitness (log2 ratio) -1
0
1
2 at 320.678 kb on - strand at 320.685 kb on + strand at 320.693 kb on - strand at 321.244 kb on - strand at 321.432 kb on - strand at 321.575 kb on + strand, within DvMF_0281 at 321.594 kb on + strand, within DvMF_0281 at 321.640 kb on - strand, within DvMF_0281 at 321.752 kb on + strand, within DvMF_0281 at 321.774 kb on + strand, within DvMF_0281 at 322.153 kb on + strand at 322.261 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 9 day starvation, 37C remove 320,678 - +1.2 320,685 + +1.1 320,693 - +0.8 321,244 - +0.4 321,432 - +1.7 321,575 + DvMF_0281 0.29 +1.9 321,594 + DvMF_0281 0.31 +1.6 321,640 - DvMF_0281 0.38 +1.5 321,752 + DvMF_0281 0.53 +1.9 321,774 + DvMF_0281 0.56 +1.6 322,153 + +0.3 322,261 + +0.1
Or see this region's nucleotide sequence