Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3024

Experiment: L-Glutamic (C); no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamic (C); no added vitamins
3,157,676	+				+0.1
3,157,676	+				-0.6
3,157,676	+				+0.1
3,157,676	+				-1.0
3,157,676	+				-0.4
3,157,676	+				+0.5
3,157,677	-				+0.5
3,157,677	-				-0.8
3,157,677	-				+0.4
3,157,677	-				+0.5
3,157,677	-				-0.8
3,157,677	-				-0.4
3,157,677	-				+0.3
3,157,677	-				-0.6
3,157,677	-				-0.3
3,157,682	+				+1.0
3,157,752	+		Ga0059261_3022	0.22	+0.1
3,157,752	+		Ga0059261_3022	0.22	-0.2
3,157,752	+		Ga0059261_3022	0.22	-0.0
3,157,753	-				+0.8
3,157,753	-		Ga0059261_3022	0.23	+0.1
3,157,980	+		Ga0059261_3022	0.84	+0.2
3,158,193	+		Ga0059261_3023	0.18	-0.7
3,158,193	+		Ga0059261_3023	0.18	+0.4
3,158,194	-		Ga0059261_3023	0.18	+0.9
3,158,196	+		Ga0059261_3023	0.18	-0.2
3,158,196	+		Ga0059261_3023	0.18	+0.4
3,158,196	+		Ga0059261_3023	0.18	+0.2
3,158,196	+		Ga0059261_3023	0.18	-0.9
3,158,197	-		Ga0059261_3023	0.19	+0.3
3,158,197	-		Ga0059261_3023	0.19	-0.2
3,158,197	-		Ga0059261_3023	0.19	-0.7
3,158,197	-				-0.8
3,158,341	+		Ga0059261_3023	0.54	-0.0
3,158,341	+		Ga0059261_3023	0.54	-0.2
3,158,341	+		Ga0059261_3023	0.54	+0.2
3,158,341	+		Ga0059261_3023	0.54	+0.1
3,158,341	+		Ga0059261_3023	0.54	-0.4
3,158,342	-		Ga0059261_3023	0.54	-0.2
3,158,342	-		Ga0059261_3023	0.54	-0.2
3,158,342	-		Ga0059261_3023	0.54	-0.5
3,158,342	-		Ga0059261_3023	0.54	-0.6
3,158,507	+				-0.2
3,158,507	+				-0.1
3,158,507	+				+0.3
3,158,507	+				+0.1
3,158,507	+				-0.4
3,158,507	+				+0.1
3,158,507	+				+0.2
3,158,507	+				+0.2
3,158,507	+				-0.5
3,158,507	+				-0.1
3,158,507	+				-0.4
3,158,507	+				-1.2
3,158,508	-				+0.1
3,158,508	-				+0.5
3,158,508	-				+0.1
3,158,508	-				+0.9
3,158,508	-				+0.3
3,158,508	-				-0.7
3,158,508	-				+0.6
3,158,594	+				-0.5
3,158,594	+				+0.8
3,158,594	+				-0.5
3,158,595	-				+0.6
3,158,595	-				+0.1
3,158,617	-				-0.6
3,158,617	-				+0.3
3,158,643	+				+0.5
3,158,810	+				-0.0
3,158,810	+				+0.2
3,158,810	+				-0.0
3,158,810	+				-0.8
3,158,810	+				+0.1
3,158,810	+				-2.4
3,158,810	+				+0.3
3,158,810	+				+0.3
3,158,811	-				+0.1
3,158,812	+				-0.6
3,158,813	-				-0.0
3,158,813	-				+0.3
3,158,825	+				+0.4
3,158,826	-				-0.1
3,158,870	+		Ga0059261_3024	0.11	-0.2
3,158,912	-		Ga0059261_3024	0.13	+0.2
3,158,912	-		Ga0059261_3024	0.13	+0.4
3,159,053	+		Ga0059261_3024	0.20	-1.1
3,159,110	+		Ga0059261_3024	0.23	-0.2
3,159,110	+		Ga0059261_3024	0.23	-0.2
3,159,110	+		Ga0059261_3024	0.23	+0.4
3,159,110	+		Ga0059261_3024	0.23	+0.1
3,159,111	-		Ga0059261_3024	0.23	+0.2
3,159,111	-		Ga0059261_3024	0.23	-0.1
3,159,111	-		Ga0059261_3024	0.23	-0.0
3,159,111	-		Ga0059261_3024	0.23	-0.5
3,159,242	+		Ga0059261_3024	0.29	+2.3
3,159,242	+		Ga0059261_3024	0.29	+1.1
3,159,243	-		Ga0059261_3024	0.29	-0.0
3,159,243	-		Ga0059261_3024	0.29	+0.6
3,159,243	-		Ga0059261_3024	0.29	+0.0
3,159,500	+		Ga0059261_3024	0.42	+0.5
3,159,500	+		Ga0059261_3024	0.42	+0.4
3,159,500	+		Ga0059261_3024	0.42	-0.0
3,159,500	+		Ga0059261_3024	0.42	+1.0
3,159,500	+		Ga0059261_3024	0.42	+0.1
3,159,501	-		Ga0059261_3024	0.42	+0.3
3,159,501	-		Ga0059261_3024	0.42	+0.2
3,159,501	-		Ga0059261_3024	0.42	-0.8
3,159,590	+		Ga0059261_3024	0.47	+0.3
3,159,591	-		Ga0059261_3024	0.47	+0.3
3,159,638	+		Ga0059261_3024	0.49	-0.2
3,159,639	-		Ga0059261_3024	0.49	-0.1
3,160,022	+		Ga0059261_3024	0.69	+0.7
3,160,022	+		Ga0059261_3024	0.69	+1.8
3,160,023	-		Ga0059261_3024	0.69	+0.1
3,160,023	-		Ga0059261_3024	0.69	+0.1
3,160,023	-		Ga0059261_3024	0.69	+1.0
3,160,023	-		Ga0059261_3024	0.69	+0.8
3,160,023	-		Ga0059261_3024	0.69	+1.2
3,160,023	-		Ga0059261_3024	0.69	-0.3
3,160,023	-		Ga0059261_3024	0.69	+0.2
3,160,151	+		Ga0059261_3024	0.75	+0.1
3,160,151	+		Ga0059261_3024	0.75	-0.8
3,160,151	+		Ga0059261_3024	0.75	+0.4
3,160,151	+		Ga0059261_3024	0.75	+0.4
3,160,151	+		Ga0059261_3024	0.75	-0.1
3,160,151	+		Ga0059261_3024	0.75	+0.1
3,160,151	+		Ga0059261_3024	0.75	-0.3
3,160,151	+		Ga0059261_3024	0.75	+0.1
3,160,151	+		Ga0059261_3024	0.75	+0.1
3,160,151	+		Ga0059261_3024	0.75	-0.1
3,160,151	+		Ga0059261_3024	0.75	+0.2
3,160,152	-		Ga0059261_3024	0.75	-0.1
3,160,152	-		Ga0059261_3024	0.75	+0.0
3,160,230	-		Ga0059261_3024	0.79	+0.5
3,160,259	+		Ga0059261_3024	0.81	+0.5
3,160,259	+		Ga0059261_3024	0.81	+0.4
3,160,259	+		Ga0059261_3024	0.81	+0.7
3,160,260	-		Ga0059261_3024	0.81	-0.3
3,160,260	-		Ga0059261_3024	0.81	+1.1
3,160,260	-		Ga0059261_3024	0.81	+0.2
3,160,260	-		Ga0059261_3024	0.81	+0.5
3,160,260	-		Ga0059261_3024	0.81	+0.7
3,160,288	+		Ga0059261_3024	0.82	-0.8
3,160,288	+		Ga0059261_3024	0.82	+0.6
3,160,288	+		Ga0059261_3024	0.82	+0.2
3,160,288	+		Ga0059261_3024	0.82	+0.2
3,160,289	-		Ga0059261_3024	0.82	+0.0
3,160,589	+				-0.2
3,160,590	-				+1.0
3,160,590	-				+0.1
3,160,641	-				+0.7
3,160,641	-				+0.7
3,160,911	+		Ga0059261_3025	0.27	+0.6
3,160,911	+		Ga0059261_3025	0.27	-0.4
3,160,912	-		Ga0059261_3025	0.27	+0.2
3,160,912	-		Ga0059261_3025	0.27	-1.1
3,160,912	-		Ga0059261_3025	0.27	+0.0
3,160,912	-		Ga0059261_3025	0.27	-0.2
3,160,943	-		Ga0059261_3025	0.31	-0.2
3,161,181	+		Ga0059261_3025	0.68	+0.4
3,161,181	+		Ga0059261_3025	0.68	+0.9
3,161,182	-		Ga0059261_3025	0.69	+0.3
3,161,182	-				-0.2
3,161,182	-		Ga0059261_3025	0.69	-0.3
3,161,182	-		Ga0059261_3025	0.69	-0.0
3,161,287	+				+0.8
3,161,288	-		Ga0059261_3025	0.85	-0.2
3,161,368	+				-1.0
3,161,368	+				+0.8
3,161,368	+				-0.3
3,161,368	+				-1.4
3,161,368	+				-0.1
3,161,368	+				-0.2
3,161,368	+				+0.5
3,161,368	+				-0.3
3,161,369	-				-0.7
3,161,369	-				+0.2
3,161,369	-				+0.2
3,161,442	+				-1.5
3,161,442	+				-0.4
3,161,443	-				+0.6
3,161,443	-				+0.2
3,161,443	-				+0.5
3,161,545	+		Ga0059261_3026	0.26	+0.0