Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS33725

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS33720 and AZOBR_RS33725 are separated by 35 nucleotidesAZOBR_RS33725 and AZOBR_RS33730 are separated by 397 nucleotides AZOBR_RS33720: AZOBR_RS33720 - UDP-glucose 6-dehydrogenase, at 93,145 to 94,470 _RS33720 AZOBR_RS33725: AZOBR_RS33725 - phosphomannomutase, at 94,506 to 95,912 _RS33725 AZOBR_RS33730: AZOBR_RS33730 - hypothetical protein, at 96,310 to 96,828 _RS33730 Position (kb) 94 95 96Strain fitness (log2 ratio) -1 0 1at 94.999 kb on - strand, within AZOBR_RS33725at 95.530 kb on - strand, within AZOBR_RS33725

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
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94,999 - AZOBR_RS33725 0.35 +1.6
95,530 - AZOBR_RS33725 0.73 -0.1

Or see this region's nucleotide sequence