Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27745 and AZOBR_RS27750 are separated by 14 nucleotides AZOBR_RS27750 and AZOBR_RS27755 are separated by 131 nucleotides
AZOBR_RS27745: AZOBR_RS27745 - ethanolamine ammonia lyase large subunit, at 389,778 to 391,172
_RS27745
AZOBR_RS27750: AZOBR_RS27750 - ethanolamine ammonia-lyase, at 391,187 to 391,966
_RS27750
AZOBR_RS27755: AZOBR_RS27755 - conserved exported protein of unknown function, at 392,098 to 394,092
_RS27755
Position (kb) 391
392 Strain fitness (log2 ratio) -2
-1
0
1
2 at 390.324 kb on + strand, within AZOBR_RS27745 at 390.325 kb on - strand, within AZOBR_RS27745 at 390.633 kb on + strand, within AZOBR_RS27745 at 390.634 kb on - strand, within AZOBR_RS27745 at 390.634 kb on - strand, within AZOBR_RS27745 at 390.714 kb on + strand, within AZOBR_RS27745 at 390.714 kb on + strand, within AZOBR_RS27745 at 390.715 kb on - strand, within AZOBR_RS27745 at 390.780 kb on + strand, within AZOBR_RS27745 at 390.781 kb on - strand, within AZOBR_RS27745 at 390.781 kb on - strand, within AZOBR_RS27745 at 390.786 kb on + strand, within AZOBR_RS27745 at 390.873 kb on + strand, within AZOBR_RS27745 at 390.874 kb on - strand, within AZOBR_RS27745 at 390.874 kb on - strand, within AZOBR_RS27745 at 390.991 kb on - strand, within AZOBR_RS27745 at 391.020 kb on + strand, within AZOBR_RS27745 at 391.020 kb on + strand, within AZOBR_RS27745 at 391.021 kb on - strand, within AZOBR_RS27745 at 391.021 kb on - strand, within AZOBR_RS27745 at 391.021 kb on - strand, within AZOBR_RS27745 at 391.757 kb on + strand, within AZOBR_RS27750 at 391.758 kb on - strand, within AZOBR_RS27750 at 391.758 kb on - strand, within AZOBR_RS27750 at 392.293 kb on + strand at 392.294 kb on - strand at 392.294 kb on - strand at 392.353 kb on + strand, within AZOBR_RS27755 at 392.393 kb on - strand, within AZOBR_RS27755 at 392.941 kb on + strand, within AZOBR_RS27755 at 392.942 kb on - strand, within AZOBR_RS27755
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB remove 390,324 + AZOBR_RS27745 0.39 -0.5 390,325 - AZOBR_RS27745 0.39 +0.2 390,633 + AZOBR_RS27745 0.61 +0.7 390,634 - AZOBR_RS27745 0.61 +1.0 390,634 - AZOBR_RS27745 0.61 +0.0 390,714 + AZOBR_RS27745 0.67 +0.7 390,714 + AZOBR_RS27745 0.67 +1.9 390,715 - AZOBR_RS27745 0.67 +0.7 390,780 + AZOBR_RS27745 0.72 -0.0 390,781 - AZOBR_RS27745 0.72 +1.3 390,781 - AZOBR_RS27745 0.72 -0.1 390,786 + AZOBR_RS27745 0.72 +1.3 390,873 + AZOBR_RS27745 0.78 +0.0 390,874 - AZOBR_RS27745 0.79 -0.1 390,874 - AZOBR_RS27745 0.79 +0.5 390,991 - AZOBR_RS27745 0.87 -0.1 391,020 + AZOBR_RS27745 0.89 +0.6 391,020 + AZOBR_RS27745 0.89 -1.0 391,021 - AZOBR_RS27745 0.89 +0.4 391,021 - AZOBR_RS27745 0.89 -0.3 391,021 - AZOBR_RS27745 0.89 -0.7 391,757 + AZOBR_RS27750 0.73 +0.4 391,758 - AZOBR_RS27750 0.73 -0.2 391,758 - AZOBR_RS27750 0.73 -2.3 392,293 + +0.2 392,294 - +0.3 392,294 - -1.4 392,353 + AZOBR_RS27755 0.13 -1.8 392,393 - AZOBR_RS27755 0.15 -0.0 392,941 + AZOBR_RS27755 0.42 +0.2 392,942 - AZOBR_RS27755 0.42 +0.1
Or see this region's nucleotide sequence