Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS06850

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS06845 and AZOBR_RS06850 are separated by 334 nucleotidesAZOBR_RS06850 and AZOBR_RS06855 are separated by 15 nucleotidesAZOBR_RS06855 and AZOBR_RS06860 are separated by 131 nucleotides AZOBR_RS06845: AZOBR_RS06845 - pyruvate kinase, at 1,452,541 to 1,453,983 _RS06845 AZOBR_RS06850: AZOBR_RS06850 - 30S ribosomal protein S13, at 1,454,318 to 1,454,686 _RS06850 AZOBR_RS06855: AZOBR_RS06855 - 30S ribosomal protein S11, at 1,454,702 to 1,455,100 _RS06855 AZOBR_RS06860: AZOBR_RS06860 - DNA-directed RNA polymerase subunit alpha, at 1,455,232 to 1,456,251 _RS06860 Position (kb) 1454 1455Strain fitness (log2 ratio) -1 0 1at 1454.000 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB
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1,454,000 - +0.2

Or see this region's nucleotide sequence