Experiment: 8 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2637 and DvMF_2638 are separated by 36 nucleotides DvMF_2638 and DvMF_2639 are separated by 540 nucleotides
DvMF_2637: DvMF_2637 - diguanylate cyclase with extracellular sensor (RefSeq), at 3,333,700 to 3,335,124
_2637
DvMF_2638: DvMF_2638 - UDP-N-acetylglucosamine 2-epimerase (RefSeq), at 3,335,161 to 3,336,594
_2638
DvMF_2639: DvMF_2639 - hypothetical protein (RefSeq), at 3,337,135 to 3,337,593
_2639
Position (kb)
3335
3336
3337 Strain fitness (log2 ratio)
-1
0
1 at 3334.211 kb on + strand, within DvMF_2637 at 3334.230 kb on + strand, within DvMF_2637 at 3334.238 kb on - strand, within DvMF_2637 at 3334.450 kb on + strand, within DvMF_2637 at 3334.458 kb on - strand, within DvMF_2637 at 3334.633 kb on + strand, within DvMF_2637 at 3334.641 kb on - strand, within DvMF_2637 at 3334.980 kb on + strand, within DvMF_2637 at 3334.980 kb on + strand, within DvMF_2637 at 3334.997 kb on + strand at 3335.061 kb on - strand at 3335.074 kb on + strand at 3335.082 kb on - strand at 3335.082 kb on - strand at 3335.082 kb on - strand at 3335.082 kb on - strand at 3335.305 kb on + strand, within DvMF_2638 at 3335.464 kb on + strand, within DvMF_2638 at 3335.464 kb on + strand, within DvMF_2638 at 3335.725 kb on + strand, within DvMF_2638 at 3335.751 kb on + strand, within DvMF_2638 at 3335.818 kb on - strand, within DvMF_2638 at 3335.956 kb on + strand, within DvMF_2638 at 3336.286 kb on - strand, within DvMF_2638 at 3336.375 kb on + strand, within DvMF_2638 at 3336.422 kb on - strand, within DvMF_2638 at 3336.618 kb on + strand at 3336.673 kb on + strand at 3336.742 kb on - strand at 3336.900 kb on - strand at 3337.006 kb on + strand at 3337.238 kb on - strand, within DvMF_2639 at 3337.253 kb on - strand, within DvMF_2639 at 3337.271 kb on - strand, within DvMF_2639 at 3337.302 kb on - strand, within DvMF_2639
Per-strain Table
Position Strand Gene LocusTag Fraction 8 day starvation, 37C remove 3,334,211 + DvMF_2637 0.36 +0.4 3,334,230 + DvMF_2637 0.37 +0.5 3,334,238 - DvMF_2637 0.38 +0.5 3,334,450 + DvMF_2637 0.53 -0.1 3,334,458 - DvMF_2637 0.53 +0.7 3,334,633 + DvMF_2637 0.65 +0.4 3,334,641 - DvMF_2637 0.66 -0.4 3,334,980 + DvMF_2637 0.90 +0.6 3,334,980 + DvMF_2637 0.90 +0.2 3,334,997 + +0.8 3,335,061 - +0.7 3,335,074 + +0.3 3,335,082 - +0.7 3,335,082 - +0.5 3,335,082 - +0.2 3,335,082 - +0.6 3,335,305 + DvMF_2638 0.10 -0.0 3,335,464 + DvMF_2638 0.21 +0.6 3,335,464 + DvMF_2638 0.21 +0.6 3,335,725 + DvMF_2638 0.39 +1.0 3,335,751 + DvMF_2638 0.41 +0.6 3,335,818 - DvMF_2638 0.46 +0.5 3,335,956 + DvMF_2638 0.55 +1.0 3,336,286 - DvMF_2638 0.78 +0.5 3,336,375 + DvMF_2638 0.85 -0.1 3,336,422 - DvMF_2638 0.88 +0.5 3,336,618 + +0.5 3,336,673 + +0.4 3,336,742 - +0.1 3,336,900 - +0.9 3,337,006 + +1.2 3,337,238 - DvMF_2639 0.22 +0.1 3,337,253 - DvMF_2639 0.26 -0.0 3,337,271 - DvMF_2639 0.30 +0.4 3,337,302 - DvMF_2639 0.36 +0.5
Or see this region's nucleotide sequence