Experiment: 8 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2072 and DvMF_2073 are separated by 219 nucleotides DvMF_2073 and DvMF_2074 are separated by 168 nucleotides
DvMF_2072: DvMF_2072 - hypothetical protein (RefSeq), at 2,572,308 to 2,573,084
_2072
DvMF_2073: DvMF_2073 - hypothetical protein (RefSeq), at 2,573,304 to 2,574,506
_2073
DvMF_2074: DvMF_2074 - glycosyl transferase family 2 (RefSeq), at 2,574,675 to 2,575,799
_2074
Position (kb)
2573
2574
2575 Strain fitness (log2 ratio)
-1
0
1
2 at 2572.339 kb on + strand at 2572.429 kb on + strand, within DvMF_2072 at 2572.442 kb on - strand, within DvMF_2072 at 2572.670 kb on + strand, within DvMF_2072 at 2572.803 kb on + strand, within DvMF_2072 at 2573.128 kb on + strand at 2573.136 kb on - strand at 2573.192 kb on + strand at 2573.213 kb on - strand at 2573.255 kb on - strand at 2573.291 kb on + strand at 2573.448 kb on + strand, within DvMF_2073 at 2573.529 kb on + strand, within DvMF_2073 at 2573.791 kb on - strand, within DvMF_2073 at 2573.822 kb on + strand, within DvMF_2073 at 2574.043 kb on - strand, within DvMF_2073 at 2574.043 kb on - strand, within DvMF_2073 at 2574.103 kb on - strand, within DvMF_2073 at 2574.313 kb on - strand, within DvMF_2073 at 2574.575 kb on - strand at 2574.703 kb on - strand at 2574.763 kb on - strand at 2574.779 kb on + strand at 2574.943 kb on - strand, within DvMF_2074 at 2574.962 kb on - strand, within DvMF_2074 at 2574.990 kb on + strand, within DvMF_2074 at 2574.997 kb on + strand, within DvMF_2074 at 2575.005 kb on - strand, within DvMF_2074 at 2575.066 kb on + strand, within DvMF_2074 at 2575.080 kb on + strand, within DvMF_2074 at 2575.088 kb on - strand, within DvMF_2074 at 2575.113 kb on - strand, within DvMF_2074 at 2575.128 kb on - strand, within DvMF_2074 at 2575.128 kb on - strand, within DvMF_2074 at 2575.213 kb on + strand, within DvMF_2074 at 2575.389 kb on - strand, within DvMF_2074
Per-strain Table
Position Strand Gene LocusTag Fraction 8 day starvation, 37C remove 2,572,339 + +1.7 2,572,429 + DvMF_2072 0.16 +0.8 2,572,442 - DvMF_2072 0.17 -0.1 2,572,670 + DvMF_2072 0.47 +1.0 2,572,803 + DvMF_2072 0.64 -0.0 2,573,128 + -0.3 2,573,136 - +0.1 2,573,192 + +0.5 2,573,213 - +0.5 2,573,255 - +0.5 2,573,291 + +0.2 2,573,448 + DvMF_2073 0.12 +0.7 2,573,529 + DvMF_2073 0.19 +0.8 2,573,791 - DvMF_2073 0.40 +0.5 2,573,822 + DvMF_2073 0.43 +1.2 2,574,043 - DvMF_2073 0.61 +1.2 2,574,043 - DvMF_2073 0.61 +2.0 2,574,103 - DvMF_2073 0.66 +2.0 2,574,313 - DvMF_2073 0.84 +0.8 2,574,575 - +1.3 2,574,703 - +1.6 2,574,763 - +1.2 2,574,779 + +1.8 2,574,943 - DvMF_2074 0.24 +1.2 2,574,962 - DvMF_2074 0.26 +0.5 2,574,990 + DvMF_2074 0.28 +1.4 2,574,997 + DvMF_2074 0.29 +1.2 2,575,005 - DvMF_2074 0.29 +1.2 2,575,066 + DvMF_2074 0.35 +1.3 2,575,080 + DvMF_2074 0.36 +1.3 2,575,088 - DvMF_2074 0.37 +0.6 2,575,113 - DvMF_2074 0.39 +1.0 2,575,128 - DvMF_2074 0.40 +1.0 2,575,128 - DvMF_2074 0.40 +0.4 2,575,213 + DvMF_2074 0.48 +1.1 2,575,389 - DvMF_2074 0.63 +1.6
Or see this region's nucleotide sequence