Experiment: 8 day starvation, 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0638 and DvMF_0639 overlap by 4 nucleotides DvMF_0639 and DvMF_0640 overlap by 4 nucleotides DvMF_0640 and DvMF_0641 are separated by 109 nucleotides
DvMF_0638: DvMF_0638 - hypothetical protein (RefSeq), at 762,226 to 762,693
_0638
DvMF_0639: DvMF_0639 - Methyltransferase type 11 (RefSeq), at 762,690 to 763,613
_0639
DvMF_0640: DvMF_0640 - protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq), at 763,610 to 766,318
_0640
DvMF_0641: DvMF_0641 - aldehyde oxidase and xanthine dehydrogenase molybdopterin binding (RefSeq), at 766,428 to 769,145
_0641
Position (kb) 763
764
765
766
767 Strain fitness (log2 ratio) -1
0
1 at 762.858 kb on + strand, within DvMF_0639 at 762.866 kb on - strand, within DvMF_0639 at 762.882 kb on + strand, within DvMF_0639 at 763.063 kb on + strand, within DvMF_0639 at 763.066 kb on - strand, within DvMF_0639 at 763.071 kb on - strand, within DvMF_0639 at 763.076 kb on - strand, within DvMF_0639 at 763.162 kb on + strand, within DvMF_0639 at 764.104 kb on + strand, within DvMF_0640 at 764.144 kb on + strand, within DvMF_0640 at 764.466 kb on - strand, within DvMF_0640 at 764.473 kb on + strand, within DvMF_0640 at 764.613 kb on + strand, within DvMF_0640 at 764.647 kb on - strand, within DvMF_0640 at 764.797 kb on - strand, within DvMF_0640 at 764.850 kb on + strand, within DvMF_0640 at 764.858 kb on - strand, within DvMF_0640 at 765.119 kb on + strand, within DvMF_0640 at 765.214 kb on + strand, within DvMF_0640 at 765.283 kb on + strand, within DvMF_0640 at 765.292 kb on + strand, within DvMF_0640 at 765.338 kb on - strand, within DvMF_0640 at 765.574 kb on + strand, within DvMF_0640 at 765.777 kb on - strand, within DvMF_0640 at 765.885 kb on + strand, within DvMF_0640 at 766.047 kb on + strand, within DvMF_0640 at 766.257 kb on + strand at 766.437 kb on + strand at 766.456 kb on + strand at 766.627 kb on + strand at 766.697 kb on + strand at 767.021 kb on - strand, within DvMF_0641 at 767.081 kb on - strand, within DvMF_0641 at 767.174 kb on - strand, within DvMF_0641 at 767.179 kb on + strand, within DvMF_0641 at 767.194 kb on + strand, within DvMF_0641 at 767.315 kb on - strand, within DvMF_0641
Per-strain Table
Position Strand Gene LocusTag Fraction 8 day starvation, 37C remove 762,858 + DvMF_0639 0.18 +0.0 762,866 - DvMF_0639 0.19 +0.5 762,882 + DvMF_0639 0.21 +0.4 763,063 + DvMF_0639 0.40 -0.2 763,066 - DvMF_0639 0.41 +1.0 763,071 - DvMF_0639 0.41 +1.0 763,076 - DvMF_0639 0.42 +0.5 763,162 + DvMF_0639 0.51 +1.2 764,104 + DvMF_0640 0.18 -0.0 764,144 + DvMF_0640 0.20 -0.1 764,466 - DvMF_0640 0.32 +0.6 764,473 + DvMF_0640 0.32 +1.6 764,613 + DvMF_0640 0.37 +0.2 764,647 - DvMF_0640 0.38 +0.2 764,797 - DvMF_0640 0.44 +0.7 764,850 + DvMF_0640 0.46 +1.0 764,858 - DvMF_0640 0.46 +0.6 765,119 + DvMF_0640 0.56 +0.1 765,214 + DvMF_0640 0.59 -0.4 765,283 + DvMF_0640 0.62 +0.5 765,292 + DvMF_0640 0.62 +0.4 765,338 - DvMF_0640 0.64 -1.7 765,574 + DvMF_0640 0.72 +0.4 765,777 - DvMF_0640 0.80 +0.7 765,885 + DvMF_0640 0.84 +1.0 766,047 + DvMF_0640 0.90 +0.0 766,257 + -0.1 766,437 + +0.9 766,456 + +0.7 766,627 + +1.0 766,697 + +1.1 767,021 - DvMF_0641 0.22 +0.7 767,081 - DvMF_0641 0.24 +0.6 767,174 - DvMF_0641 0.27 +0.9 767,179 + DvMF_0641 0.28 -0.4 767,194 + DvMF_0641 0.28 +0.6 767,315 - DvMF_0641 0.33 +0.5
Or see this region's nucleotide sequence